G2134334


Basic Information

Item Value
gene id G2134334
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 37928436 ~ 37929483 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2440504
gtgtatgtgtgtggtgtgtttgtttgtgtgtgtggttggcgGGGCCAAGTGTTGCAAATAGACAAACTGTTTTCACATGAGTATGTGTGTTACATCTAGAGAGAAATATAAATGTGTATGTAAAAATATTGATGAATACTGTGGAGCAGCAGGGCTAGAGGAACAAGCTCAAGCTGAGCACTGTCCCCTTAACGAGGCTGTGGAGCAACACTCTAATGAACTGCTGTGGAGCAACACTCTAATGAACTGCTGTGGAGCAACACTCTAATGAACTGCTGTGGAGCAGCACTCTAATGGACTGCTGTGGAGCAGCACTCTAATGGACTGCTGTGGAGCAACACTCTAATGGACTGCTGTGGAGCACTCTAATGGACTGCTGTGGAGCAACACTCTAATGAACTGCTGTGGAGCAGCACTCTAATGGACTGCTGTGGAGCAGCACTCTAATGGACTGCTGTGGAGCAGCACTCTAATGGACTGCTGTGGAGCAGCACTCTAATGGACTGCTGTGGAGCAGCACTCTAATGAACTGCTGTGGAGCAGCACTCTAATGAACTGCTGTGGAGCAGCACTCTAATGGACTGCTGTGGAGCAGCACTCTAATGGACTGCTGTGGAGCAGCACTCTAATGGACTGCTGTGGAGCAGCACTCTAATGAACTGCTGTGGAGCAGCACTCTAATGGACTGCTGTGGAGCAGCACTCTAATGGACTGCTGTGGAGCAACACTCTAATGGACTGCTGTGGAGCAGCACTCTAATGAACTGCTGTGGAGCAGCACTCTAATGGACTGCTGTGGAGCAGCACTCTAATGGACTGCTGTGGAGCAACAATCTAATGAACTGCTGTGGAGCAGCACTCTAATGAACTGCTGTGGAGCAGCACTCTAATGGACTGCTGTGGAGCAGCACTCTAATGGACTGCTGTGGAGCAGCACTCTAA

Function

NR:

description
pollen-specific leucine-rich repeat extensin-like protein 1 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2440504 True 941 lncRNA 0.50 2 37928436 37929483

Neighbor

gene id symbol gene type direction distance location
LOC110509125 LOC106596905 coding upstream 233805 37674818 ~ 37694631 (+)
LOC110509126 LOC106596905 coding upstream 277451 37625498 ~ 37650985 (+)
LOC110509119 rala coding upstream 457635 37447739 ~ 37470801 (+)
c28h7orf25 cssa03h7orf25 coding upstream 485538 37438032 ~ 37442898 (+)
LOC118944833 NA coding upstream 946176 36977174 ~ 36982260 (+)
LOC110509128 LOC100136478 coding downstream 281793 38211276 ~ 38229238 (+)
LOC110508247 LOC106596897 coding downstream 362903 38292386 ~ 38526926 (+)
LOC110509131 LOC106596891 coding downstream 605074 38534557 ~ 38549486 (+)
LOC118944835 NA coding downstream 819533 38749016 ~ 38756005 (+)
LOC118944840 LOC106596771 coding downstream 860012 38789495 ~ 39333323 (+)
G2134326 NA non-coding upstream 15774 37912163 ~ 37912662 (+)
G2134290 NA non-coding upstream 70759 37844867 ~ 37857677 (+)
G2134291 NA non-coding upstream 70985 37856234 ~ 37857451 (+)
G2134288 NA non-coding upstream 87483 37840562 ~ 37840953 (+)
G2134263 NA non-coding upstream 91092 37769612 ~ 37837344 (+)
G2134445 NA non-coding downstream 214718 38144201 ~ 38144424 (+)
G2134450 NA non-coding downstream 218488 38147971 ~ 38148270 (+)
G2134451 NA non-coding downstream 219382 38148865 ~ 38149087 (+)
G2134646 NA non-coding downstream 235178 38164661 ~ 38164872 (+)
G2134649 NA non-coding downstream 236678 38166161 ~ 38166435 (+)
G2133551 NA other upstream 889512 37038653 ~ 37038924 (+)
LOC110509112 LOC106597339 other upstream 1403021 36522754 ~ 36528580 (+)
G2132611 LOC100380659 other upstream 1558469 36365556 ~ 36369967 (+)
G2132519 LOC100380659 other upstream 1563442 36339094 ~ 36364994 (+)
LOC110508289 LOC106597230 other upstream 1953304 35973386 ~ 35975132 (+)
G2134356 NA other downstream 39620 37969103 ~ 37969465 (+)
G2134434 NA other downstream 193913 38123396 ~ 38143819 (+)
G2135186 NA other downstream 917997 38847480 ~ 38848317 (+)

Expression


Co-expression Network