G2135013



Basic Information


Item Value
gene id G2135013
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 38454745 ~ 38455838 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2441311
ATATTAACCAACAAGATCATGAACTAAATTTCCTgactgtattatacagtatctgtattggtATTAGTAACAACAGACATTTGATCTTGACAAGCAACACGAAATGACTGTAAAgtctgaatatgtctgtaaagtggctctggatcagagagtctgctaaatgactcactactgtaagtctctctggataagagagtctgctaaatgactcactactgtagtggctctggatcagagagtctgctaaatgactcactactgtagtgactctggataagagagtctgttaaatgactcactactgtagtgactctggataagagagtctgttaaatgactcactactgtagtggctctggatcagagagtctgctaaatgactcactactgtagtgactctggataagagtgtctgttaaatgactcactactgtagtggctctggataagagagtctgttaaatgactcactactgtagtgactctggataagagagtctgttaaatgactcactactgtagtggctctggatcagagagtctgctaaatgactcactactgtagtgactctggataagagagtctgctaaatgactcactactgtagtgactctggataagagagtctgttaaatgactcactactgtagtgactctggataagagagtctgttaaatgactcactactgtagtgactctggataagagagtctgttaaatgactcactactgtagtggctctggatcagagagtctgctaaatgactcactactgtagtgactctggataa

Function


NR:

description
PREDICTED: uncharacterized protein LOC106586928

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2441311 True 793 lncRNA 0.40 2 38454745 38455838

Neighbor


gene id symbol gene type direction distance location
LOC110509127 LOC106596915 coding downstream 458523 37766370 ~ 37996222 (-)
LOC110509123 LOC106596905 coding downstream 849865 37578708 ~ 37645494 (-)
inhbab inhba coding downstream 893535 37546812 ~ 37561210 (-)
LOC110509120 mplkip coding downstream 981197 37471456 ~ 37473548 (-)
fbxl7 fbxl7 coding downstream 983901 37337525 ~ 37470844 (-)
LOC110509132 LOC106596853 coding upstream 118879 38574717 ~ 38644750 (-)
LOC110509133 LOC106592421 coding upstream 201966 38657804 ~ 38673221 (-)
LOC118944870 LOC106596806 coding upstream 229437 38685275 ~ 38702608 (-)
LOC110509137 LOC105025287 coding upstream 1122379 39577116 ~ 39621092 (-)
LOC118944811 NA coding upstream 1123856 39579694 ~ 39582551 (-)
G2135011 NA non-coding downstream 1737 38450901 ~ 38453008 (-)
G2135001 NA non-coding downstream 24239 38430030 ~ 38430506 (-)
G2134965 NA non-coding downstream 108690 38344781 ~ 38346055 (-)
G2134945 NA non-coding downstream 142729 38309166 ~ 38312016 (-)
G2134921 NA non-coding downstream 191238 38263201 ~ 38263507 (-)
G2135031 NA non-coding upstream 45046 38500884 ~ 38508083 (-)
G2135045 NA non-coding upstream 86691 38542529 ~ 38543160 (-)
G2135059 NA non-coding upstream 103780 38559618 ~ 38562656 (-)
G2135040 NA non-coding upstream 116686 38572524 ~ 38572926 (-)
G2135096 NA non-coding upstream 205252 38661090 ~ 38662162 (-)
G2134625 NA other downstream 324338 38128129 ~ 38130407 (-)
LOC110509111 LOC106597319 other downstream 1897292 36526794 ~ 36557532 (-)
G2133007 NA other downstream 2191415 36263002 ~ 36263330 (-)
G2132966 NA other downstream 2204970 36235515 ~ 36249775 (-)
G2135034 LOC106596897 other upstream 63733 38519571 ~ 38526920 (-)
G2135837 NA other upstream 549623 39005461 ~ 39006050 (-)
LOC110509145 ankrd12 other upstream 1347957 39778552 ~ 39829207 (-)
G2136189 NA other upstream 1487315 39943153 ~ 39945834 (-)
LOC110508256 LOC106596607 other upstream 1534725 39973367 ~ 40103148 (-)

Expression



Co-expression Network