Gene
RNA
| Item | Value |
|---|---|
| gene id | G2135034 |
| gene name | LOC106596897 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 38519571 ~ 38526920 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: LOW QUALITY PROTEIN: collagen alpha-1(XI) chain-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2441345 | True | 2540 | TUCP | 0.43 | 3 | 38519571 | 38526920 |
38,514,000
38,515,000
38,516,000
38,517,000
38,518,000
38,519,000
38,520,000
38,521,000
38,522,000
38,523,000
38,523,000
38,524,000
38,525,000
38,526,000
38,527,000
38,528,000
38,529,000
38,530,000
38,531,000
38,532,000
NC_048592.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509127 | LOC106596915 | coding | downstream | 523349 | 37766370 ~ 37996222 (-) |
| LOC110509123 | LOC106596905 | coding | downstream | 914691 | 37578708 ~ 37645494 (-) |
| inhbab | inhba | coding | downstream | 958361 | 37546812 ~ 37561210 (-) |
| LOC110509120 | mplkip | coding | downstream | 1046023 | 37471456 ~ 37473548 (-) |
| fbxl7 | fbxl7 | coding | downstream | 1048727 | 37337525 ~ 37470844 (-) |
| LOC110509132 | LOC106596853 | coding | upstream | 47797 | 38574717 ~ 38644750 (-) |
| LOC110509133 | LOC106592421 | coding | upstream | 130884 | 38657804 ~ 38673221 (-) |
| LOC118944870 | LOC106596806 | coding | upstream | 158355 | 38685275 ~ 38702608 (-) |
| LOC110509137 | LOC105025287 | coding | upstream | 1051297 | 39577116 ~ 39621092 (-) |
| LOC118944811 | NA | coding | upstream | 1052774 | 39579694 ~ 39582551 (-) |
| G2135031 | NA | non-coding | downstream | 11488 | 38500884 ~ 38508083 (-) |
| G2135013 | NA | non-coding | downstream | 63733 | 38454745 ~ 38455838 (-) |
| G2135011 | NA | non-coding | downstream | 66563 | 38450901 ~ 38453008 (-) |
| G2135001 | NA | non-coding | downstream | 89065 | 38430030 ~ 38430506 (-) |
| G2134965 | NA | non-coding | downstream | 173516 | 38344781 ~ 38346055 (-) |
| G2135045 | NA | non-coding | upstream | 15609 | 38542529 ~ 38543160 (-) |
| G2135059 | NA | non-coding | upstream | 32698 | 38559618 ~ 38562656 (-) |
| G2135040 | NA | non-coding | upstream | 45604 | 38572524 ~ 38572926 (-) |
| G2135096 | NA | non-coding | upstream | 134170 | 38661090 ~ 38662162 (-) |
| G2135071 | NA | non-coding | upstream | 154646 | 38681566 ~ 38683375 (-) |
| G2134625 | NA | other | downstream | 389164 | 38128129 ~ 38130407 (-) |
| LOC110509111 | LOC106597319 | other | downstream | 1962118 | 36526794 ~ 36557532 (-) |
| G2133007 | NA | other | downstream | 2256241 | 36263002 ~ 36263330 (-) |
| G2132966 | NA | other | downstream | 2269796 | 36235515 ~ 36249775 (-) |
| G2135837 | NA | other | upstream | 478541 | 39005461 ~ 39006050 (-) |
| LOC110509145 | ankrd12 | other | upstream | 1276875 | 39778552 ~ 39829207 (-) |
| G2136189 | NA | other | upstream | 1416233 | 39943153 ~ 39945834 (-) |
| LOC110508256 | LOC106596607 | other | upstream | 1463643 | 39973367 ~ 40103148 (-) |
| G2136243 | NA | other | upstream | 1524719 | 40051639 ~ 40121899 (-) |
