Gene
RNA
| Item | Value |
|---|---|
| gene id | G2135991 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 39327149 ~ 39327980 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: receptor-type tyrosine-protein phosphatase mu-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2442588 | True | 600 | lncRNA | 0.44 | 3 | 39327149 | 39327980 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944870 | LOC106596806 | coding | downstream | 624541 | 38685275 ~ 38702608 (-) |
| LOC110509133 | LOC106592421 | coding | downstream | 653928 | 38657804 ~ 38673221 (-) |
| LOC110509132 | LOC106596853 | coding | downstream | 682399 | 38574717 ~ 38644750 (-) |
| LOC110509127 | LOC106596915 | coding | downstream | 1330927 | 37766370 ~ 37996222 (-) |
| LOC110509123 | LOC106596905 | coding | downstream | 1722269 | 37578708 ~ 37645494 (-) |
| LOC110509137 | LOC105025287 | coding | upstream | 250237 | 39577116 ~ 39621092 (-) |
| LOC118944811 | NA | coding | upstream | 251714 | 39579694 ~ 39582551 (-) |
| rab31 | rab31 | coding | upstream | 308483 | 39633741 ~ 39650366 (-) |
| LOC118944836 | ralbp1 | coding | upstream | 386648 | 39714554 ~ 39717684 (-) |
| LOC110509148 | LOC106596679 | coding | upstream | 391717 | 39719697 ~ 39763225 (-) |
| G2135954 | NA | non-coding | downstream | 73967 | 39252578 ~ 39253182 (-) |
| G2135878 | NA | non-coding | downstream | 225847 | 39100809 ~ 39101302 (-) |
| G2135834 | NA | non-coding | downstream | 331836 | 38995080 ~ 38995313 (-) |
| G2135808 | NA | non-coding | downstream | 336263 | 38944048 ~ 38990886 (-) |
| G2135992 | NA | non-coding | upstream | 3051 | 39331031 ~ 39332471 (-) |
| G2135995 | NA | non-coding | upstream | 5015 | 39332995 ~ 39346646 (-) |
| G2136008 | LOC106596709 | non-coding | upstream | 50231 | 39378211 ~ 39378968 (-) |
| G2136009 | NA | non-coding | upstream | 51210 | 39379190 ~ 39379395 (-) |
| G2136010 | NA | non-coding | upstream | 51883 | 39379863 ~ 39380100 (-) |
| G2135837 | NA | other | downstream | 321099 | 39005461 ~ 39006050 (-) |
| G2135034 | LOC106596897 | other | downstream | 800229 | 38519571 ~ 38526920 (-) |
| G2134625 | NA | other | downstream | 1196742 | 38128129 ~ 38130407 (-) |
| LOC110509111 | LOC106597319 | other | downstream | 2769696 | 36526794 ~ 36557532 (-) |
| LOC110509145 | ankrd12 | other | upstream | 475815 | 39778552 ~ 39829207 (-) |
| G2136189 | NA | other | upstream | 615173 | 39943153 ~ 39945834 (-) |
| LOC110508256 | LOC106596607 | other | upstream | 662583 | 39973367 ~ 40103148 (-) |
| G2136243 | NA | other | upstream | 723659 | 40051639 ~ 40121899 (-) |
| G2137086 | NA | other | upstream | 1087323 | 40415303 ~ 40415540 (-) |
