Gene
RNA
| Item | Value |
|---|---|
| gene id | G2136010 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 39379863 ~ 39380100 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106596709 isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2442609 | True | 238 | lncRNA | 0.48 | 1 | 39379863 | 39380100 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944870 | LOC106596806 | coding | downstream | 677255 | 38685275 ~ 38702608 (-) |
| LOC110509133 | LOC106592421 | coding | downstream | 706642 | 38657804 ~ 38673221 (-) |
| LOC110509132 | LOC106596853 | coding | downstream | 735113 | 38574717 ~ 38644750 (-) |
| LOC110509127 | LOC106596915 | coding | downstream | 1383641 | 37766370 ~ 37996222 (-) |
| LOC110509123 | LOC106596905 | coding | downstream | 1774983 | 37578708 ~ 37645494 (-) |
| LOC110509137 | LOC105025287 | coding | upstream | 198117 | 39577116 ~ 39621092 (-) |
| LOC118944811 | NA | coding | upstream | 199594 | 39579694 ~ 39582551 (-) |
| rab31 | rab31 | coding | upstream | 256363 | 39633741 ~ 39650366 (-) |
| LOC118944836 | ralbp1 | coding | upstream | 334528 | 39714554 ~ 39717684 (-) |
| LOC110509148 | LOC106596679 | coding | upstream | 339597 | 39719697 ~ 39763225 (-) |
| G2136009 | NA | non-coding | downstream | 468 | 39379190 ~ 39379395 (-) |
| G2136008 | LOC106596709 | non-coding | downstream | 895 | 39378211 ~ 39378968 (-) |
| G2135995 | NA | non-coding | downstream | 33217 | 39332995 ~ 39346646 (-) |
| G2135992 | NA | non-coding | downstream | 47392 | 39331031 ~ 39332471 (-) |
| G2135991 | NA | non-coding | downstream | 51883 | 39327149 ~ 39327980 (-) |
| G2136011 | LOC106596709 | non-coding | upstream | 284 | 39380384 ~ 39382268 (-) |
| G2136040 | NA | non-coding | upstream | 44106 | 39424206 ~ 39426743 (-) |
| G2136045 | NA | non-coding | upstream | 44864 | 39424964 ~ 39428092 (-) |
| G2136034 | NA | non-coding | upstream | 54022 | 39434122 ~ 39497244 (-) |
| G2136044 | NA | non-coding | upstream | 65433 | 39445533 ~ 39449370 (-) |
| G2135837 | NA | other | downstream | 373813 | 39005461 ~ 39006050 (-) |
| G2135034 | LOC106596897 | other | downstream | 852943 | 38519571 ~ 38526920 (-) |
| G2134625 | NA | other | downstream | 1249456 | 38128129 ~ 38130407 (-) |
| LOC110509111 | LOC106597319 | other | downstream | 2822410 | 36526794 ~ 36557532 (-) |
| LOC110509145 | ankrd12 | other | upstream | 423695 | 39778552 ~ 39829207 (-) |
| G2136189 | NA | other | upstream | 563053 | 39943153 ~ 39945834 (-) |
| LOC110508256 | LOC106596607 | other | upstream | 610463 | 39973367 ~ 40103148 (-) |
| G2136243 | NA | other | upstream | 671539 | 40051639 ~ 40121899 (-) |
| G2137086 | NA | other | upstream | 1035203 | 40415303 ~ 40415540 (-) |
