G2136011 (LOC106596709)


Basic Information

Item Value
gene id G2136011
gene name LOC106596709
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 39380384 ~ 39382268 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2442610
TACATTAGAGCCCACTTTATTTATTCATAATTAAACATACATCCAACAGTCGAAACCTAATTTTCACCTCAACTCGTCACAAAACCTGAACGATATTCTACCTGAGATTCCATTTCTGGCACATAGAAACACCTAGAAACTATTTCATTAAACTAAAGCTTTATTTTGTGTCACAGTTTCATTAAATCTACACTTGACGTGTCTCATAGGAACATTTCAGAACAATACAATTCTACTAtaggtattttattttttacaaataataTCTACATTTTTTTATCGAGACAAATTATTGCATTTCTTACATtgaaaaaaaacattggaatacTTAGATACCTAGATATTGATTTGTTGGTGTGGTTCACCTCATGTTGGTGATCTGAAAGCCAACGGTGTCCATGGCTTtcagacctaaaaaaaaaatggttttatatatatatattttatttatatatatatatatatatatatacatacattggggcggcagggtagcctagtggttagagcgttggactaataaccggaaggttgcaagttcaaacccccgagctgacaaggtacaaatctgtcgttctgcccctgaacaaggcagttagttacaccactgttcctagaccgtcattgaaaataagaatttgttcttaactgacttgcctagtaaaataaaggtaaataaaaaatatagcaGTGTCCATGTTCTATTGCCATCAACTGTGTACAGCTACAGTAAAAACCTCAATCCCAAACACATGGGAAAGAATAACATGACAAGACATGTCATATCTGTTGAAGAACTGGGAGCCACTCTGATCACACCCTCTCCTCTGATCTCCTGAGTTCCCTTAGGCCGCACCTTGATTCTAGATGGGGTTTGAGCATCCTCTGATCTCCTGAGTTCCCTTAAGCCACACCTTGATtctagatttatttatttatttacctgtaTTTTCCTATTCATATCCATCTAAATGATAACATGCCGAGGCAGAACTATTTAGGGTTCCTCTGTTGAAGAGCTGGGGATTACAGTATCCAGAGTTCAGATCAAGAAGAGCTAAAGGTGACTGTTACTCCCCCTCcttttccttcttcttcttctccctgaACGACTGCTACTTCCCTTTCCTCTTCCTGATTCGAGTCGGGCACACAGTCCTCACTGCCTGGGGTACGAGGCCTGCTCTGAGTCCTACTGCCTGGGGTGCGAGGCCTGCTCTGAGTCCCACTGCCTGGGGTGCGAGGCCTGCTCTGAGTCACACTGCCTGGGGTGCGAGGCCGGCTTGGAGTCCCACTGCCTGGGGCGCGAGGCCTGCTCTGAGTCCCACTGCCTGGGGTGCGAGGCCTGCTCTGAGTCCCGCTGCCTGGGGTGCGAGGCCTGCTCTGAGTCCCACTGCCTGGGGCGTGAGGCCTGCTCTGAGTCCCACTGCCTGGGGTGTGAGGCCTGCTCTGAGTCCCACTGCCTGGGGTGTGAGGCCTGCTCTGAGTCCCACTGCCTGGGGTGTGAGGCCTGCTCTGAGTCCCACTGCCTGGGGTGCGAGGCCTGCTCTGAGTCCCACTGCCTGGGGACCGAGGCCTGCTCTGAGTCCCACTGCCTGGGGTGTGAGGCCTGCTCTGAGTCCCACTGCCTGGGGCGCGAGGCCTGCTCTGAGTCCCACTGCCTGGGGTGCGAGGCCGGCTTGGAGTCCCACTGACTGGGGAGTGAGGCCTGCTCTGAGTCCCACTGCCTGGGGTGCGAGGCCGGCTTGGAGTCCCACTGACTGGGGAGTGAGGCCTGCTCTGAGTCCCACTGACTGGGGTGCGAGGCCGGCTTGGAGTCCCACTGACTGGGGAGTGAGGCCTGCTCTGAGTCCCACTGACTGGGGTAGGGCACCTGCTCCGAACA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106594931 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2442610 True 1885 lncRNA 0.49 1 39380384 39382268

Neighbor

gene id symbol gene type direction distance location
LOC118944870 LOC106596806 coding downstream 677776 38685275 ~ 38702608 (-)
LOC110509133 LOC106592421 coding downstream 707163 38657804 ~ 38673221 (-)
LOC110509132 LOC106596853 coding downstream 735634 38574717 ~ 38644750 (-)
LOC110509127 LOC106596915 coding downstream 1384162 37766370 ~ 37996222 (-)
LOC110509123 LOC106596905 coding downstream 1775504 37578708 ~ 37645494 (-)
LOC110509137 LOC105025287 coding upstream 195949 39577116 ~ 39621092 (-)
LOC118944811 NA coding upstream 197426 39579694 ~ 39582551 (-)
rab31 rab31 coding upstream 254195 39633741 ~ 39650366 (-)
LOC118944836 ralbp1 coding upstream 332360 39714554 ~ 39717684 (-)
LOC110509148 LOC106596679 coding upstream 337429 39719697 ~ 39763225 (-)
G2136010 NA non-coding downstream 284 39379863 ~ 39380100 (-)
G2136009 NA non-coding downstream 989 39379190 ~ 39379395 (-)
G2136008 LOC106596709 non-coding downstream 1416 39378211 ~ 39378968 (-)
G2135995 NA non-coding downstream 33738 39332995 ~ 39346646 (-)
G2135992 NA non-coding downstream 47913 39331031 ~ 39332471 (-)
G2136040 NA non-coding upstream 41938 39424206 ~ 39426743 (-)
G2136045 NA non-coding upstream 42696 39424964 ~ 39428092 (-)
G2136034 NA non-coding upstream 51854 39434122 ~ 39497244 (-)
G2136044 NA non-coding upstream 63265 39445533 ~ 39449370 (-)
G2136059 NA non-coding upstream 76581 39458849 ~ 39459460 (-)
G2135837 NA other downstream 374334 39005461 ~ 39006050 (-)
G2135034 LOC106596897 other downstream 853464 38519571 ~ 38526920 (-)
G2134625 NA other downstream 1249977 38128129 ~ 38130407 (-)
LOC110509111 LOC106597319 other downstream 2822931 36526794 ~ 36557532 (-)
LOC110509145 ankrd12 other upstream 421527 39778552 ~ 39829207 (-)
G2136189 NA other upstream 560885 39943153 ~ 39945834 (-)
LOC110508256 LOC106596607 other upstream 608295 39973367 ~ 40103148 (-)
G2136243 NA other upstream 669371 40051639 ~ 40121899 (-)
G2137086 NA other upstream 1033035 40415303 ~ 40415540 (-)

Expression


Co-expression Network