G2136040


Basic Information

Item Value
gene id G2136040
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 39424206 ~ 39426743 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2442652
GTAGTGTAACATAGTGTAGTGCAGCATAGTGTAGTGCAGcatagtgtagtgcagtatagtgtagtgtaacaTAGTGTAGTGCAGCATAGTGTAGTGCAGCATAGTGTAGTGCAGCATAGTGTAGTGCAGCATAGTGTAGTGCAGCATAGTGTAGTGCAGCATAGTGTAGTGTAACATAGTGTAGTGTAACAgtgtagtgcagtatagtgtaacatagtgtagtgcagtatagtgtagtgcagtatagtgtagtgtaacatagtgtagtgcagtatagtgtaAcatagtgtagtgcagtatagtgtagtgcagtatagtgtagtgcagtatagtgtagtgtaacatagtgtagtgcagtatagtgtaacatagtgtaGTGCAgtatagtgtagtgcagtatagtgtagtgtaagagtgtagtgcagtatagtgtaacatagtgtaGTGCAACATAGTGCAGtatagtgtagtgcagtatagtgtagtagtgtagtgcagtatagtgtagtccagtgtagtgtagtgcagtattgtgtagtgcagtatagtgtAGCCCTATAAACACACTGCAACTCACTCCTTATCTGCTTCTTCAGTTCCTTGTTCGGGTCCAGCCAGTTCTGGAGAAAGAGACAAATTAGTAATGATATATATTAATAAAATCAATGAATGACCATGTATCCAGTCATTAACAGAGCCTGTCACGTTACCACTTCCCTGAGAAGGTCCCCTGGGGAAACTGTTATCAGTCTGTCCACACAGAGGGCCGGTATCcacaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2442652 True 780 lncRNA 0.41 5 39424206 39426743

Neighbor

gene id symbol gene type direction distance location
LOC118944870 LOC106596806 coding downstream 721598 38685275 ~ 38702608 (-)
LOC110509133 LOC106592421 coding downstream 750985 38657804 ~ 38673221 (-)
LOC110509132 LOC106596853 coding downstream 779456 38574717 ~ 38644750 (-)
LOC110509127 LOC106596915 coding downstream 1427984 37766370 ~ 37996222 (-)
LOC110509123 LOC106596905 coding downstream 1819326 37578708 ~ 37645494 (-)
LOC110509137 LOC105025287 coding upstream 151474 39577116 ~ 39621092 (-)
LOC118944811 NA coding upstream 152951 39579694 ~ 39582551 (-)
rab31 rab31 coding upstream 209720 39633741 ~ 39650366 (-)
LOC118944836 ralbp1 coding upstream 287885 39714554 ~ 39717684 (-)
LOC110509148 LOC106596679 coding upstream 292954 39719697 ~ 39763225 (-)
G2136011 LOC106596709 non-coding downstream 41938 39380384 ~ 39382268 (-)
G2136010 NA non-coding downstream 44106 39379863 ~ 39380100 (-)
G2136009 NA non-coding downstream 44811 39379190 ~ 39379395 (-)
G2136008 LOC106596709 non-coding downstream 45238 39378211 ~ 39378968 (-)
G2135995 NA non-coding downstream 77560 39332995 ~ 39346646 (-)
G2136034 NA non-coding upstream 7379 39434122 ~ 39497244 (-)
G2136044 NA non-coding upstream 18790 39445533 ~ 39449370 (-)
G2136059 NA non-coding upstream 32106 39458849 ~ 39459460 (-)
G2136060 NA non-coding upstream 41544 39468287 ~ 39468686 (-)
G2136062 NA non-coding upstream 49317 39476060 ~ 39476768 (-)
G2135837 NA other downstream 418156 39005461 ~ 39006050 (-)
G2135034 LOC106596897 other downstream 897286 38519571 ~ 38526920 (-)
G2134625 NA other downstream 1293799 38128129 ~ 38130407 (-)
LOC110509111 LOC106597319 other downstream 2866753 36526794 ~ 36557532 (-)
LOC110509145 ankrd12 other upstream 377052 39778552 ~ 39829207 (-)
G2136189 NA other upstream 516410 39943153 ~ 39945834 (-)
LOC110508256 LOC106596607 other upstream 563820 39973367 ~ 40103148 (-)
G2136243 NA other upstream 624896 40051639 ~ 40121899 (-)
G2137086 NA other upstream 988560 40415303 ~ 40415540 (-)

Expression


Co-expression Network