G2136034



Basic Information


Item Value
gene id G2136034
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 39434122 ~ 39497244 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2442646
ctggtctaaagtagtgcactacatagcgaaaatggtgccatttgggacacaaaaaaTTCTCCCTGAACTGATATTATCGCAACTTTACATTGACCAGAGCACCTGCCCCATGGACTGCTATAGACATGTATATTAAGTACATGTACTGAATTCATGAACAAAATAAATCAGATGTTGACAATCAGAAAAATCAACTCATCAAATATGGTTTTATTTTCAGTGTGTAAGAGAACAACGCTAAATGTGCATTTACGGTGTTGTGTTCGAAATGTTTTAGATTTATGCAACTAGTcacactacagtatatacagacgtggtctctctctctctctctctctctctccgatggTATCTTGATGATGGGCTAGTGATACTGTATAACAGTAAAATCTAGTCAGAATTCATGCTGCTAAGGTGTGAACAGCCAATGAACAGCCCGTTCACATTGCTTGTCAAATCAAAAGGTTGGATTTTTAACGTTTAACTTCCAGAATTGACTTGGGAGCCTTGCTgtctatcatcatcatcatcaacaacaacaacaaaaggccCAAGACTTTGGTTTAACCTGTATCAAAATGAAGAATGGTGACTCTGGTTACCTTGTACAGTGTAAATATCAATCAATCAGCACAACTaaacattcatttaaaaaaaacaaaaaacaatctaCATGTAGGAGAATATACAGAACAACACATTTTATGCAGAgaatcatttctctctctcttcttctctctctctctctctctctct

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2442646 True 756 lncRNA 0.37 2 39434122 39497244

Neighbor


gene id symbol gene type direction distance location
LOC118944870 LOC106596806 coding downstream 731514 38685275 ~ 38702608 (-)
LOC110509133 LOC106592421 coding downstream 760901 38657804 ~ 38673221 (-)
LOC110509132 LOC106596853 coding downstream 789372 38574717 ~ 38644750 (-)
LOC110509127 LOC106596915 coding downstream 1437900 37766370 ~ 37996222 (-)
LOC110509123 LOC106596905 coding downstream 1829242 37578708 ~ 37645494 (-)
LOC110509137 LOC105025287 coding upstream 80973 39577116 ~ 39621092 (-)
LOC118944811 NA coding upstream 82450 39579694 ~ 39582551 (-)
rab31 rab31 coding upstream 139219 39633741 ~ 39650366 (-)
LOC118944836 ralbp1 coding upstream 217384 39714554 ~ 39717684 (-)
LOC110509148 LOC106596679 coding upstream 222453 39719697 ~ 39763225 (-)
G2136045 NA non-coding downstream 6030 39424964 ~ 39428092 (-)
G2136040 NA non-coding downstream 7379 39424206 ~ 39426743 (-)
G2136011 LOC106596709 non-coding downstream 51854 39380384 ~ 39382268 (-)
G2136010 NA non-coding downstream 54022 39379863 ~ 39380100 (-)
G2136009 NA non-coding downstream 54727 39379190 ~ 39379395 (-)
G2136068 NA non-coding upstream 70 39497314 ~ 39497544 (-)
G2136075 NA non-coding upstream 20041 39517285 ~ 39517700 (-)
G2136079 NA non-coding upstream 29730 39526974 ~ 39546851 (-)
G2136091 NA non-coding upstream 72149 39569393 ~ 39570347 (-)
G2136094 NA non-coding upstream 75099 39572343 ~ 39572639 (-)
G2135837 NA other downstream 428072 39005461 ~ 39006050 (-)
G2135034 LOC106596897 other downstream 907202 38519571 ~ 38526920 (-)
G2134625 NA other downstream 1303715 38128129 ~ 38130407 (-)
LOC110509111 LOC106597319 other downstream 2876669 36526794 ~ 36557532 (-)
LOC110509145 ankrd12 other upstream 306551 39778552 ~ 39829207 (-)
G2136189 NA other upstream 445909 39943153 ~ 39945834 (-)
LOC110508256 LOC106596607 other upstream 493319 39973367 ~ 40103148 (-)
G2136243 NA other upstream 554395 40051639 ~ 40121899 (-)
G2137086 NA other upstream 918059 40415303 ~ 40415540 (-)

Expression



Co-expression Network