G2136059


Basic Information

Item Value
gene id G2136059
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 39458849 ~ 39459460 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2442674
ATATCTGAAGTGTTACGCTAGagtactacagtagagtactacagtagagtactagaTTAGattactacagtagagtactagaTTAGattactacagtagagtactagaTTAGattactacagtagagtactacagtagagtactagaTTAGattactacagtagagtactagaTTAGattactacagtagagtactagaTTAGattactacagtagagtactagaTTAGattactacagtagagtactagaTTAGattactacagtagagtactacagtagagtactagaTTAGattactacagtagagtactacagtagagtactagaTTAGattactacagtagagtactacagtagagtactagaTTAGattactacagtagagtactagaTTAGattactacagtagagtactagaTTAGattactacaaTTGattactacagtagagtactacagtagagtactagaTTAGattactacagtagagtactagaTTAGattactacagtagagtactACAGCAGAATACTA
>TU2442675
ATATCTGAAGTGTTACGCTAGagtactacagtagagtactacagtagagtactagaTTAGattactacagtagagtactagaTTAGattactacagtagagtactagaTTAGattactacagtagagtactacagtagagtactagaTTAGattactacagtagagtactagaTTAGattactacagtagagtactagaTTAGattactacagtagagtactagaTTAGattactacagtagagtactagaTTAGattactacagtagagtactacagtagagtactagaTTAGattactacagtagagtactacagtagagtactagaTTAGattactacagtagagtactacagtagagtactagaTTAGattactacagtagagtactagaTTAGattactacagtagagtactagaTTAGattactacagtagagtactacagtagagtactagaTTAGattactacagtagagtactag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2442674 False 535 lncRNA 0.32 3 39458849 39459460
TU2442675 True 484 lncRNA 0.33 2 39458951 39459460

Neighbor

gene id symbol gene type direction distance location
LOC118944870 LOC106596806 coding downstream 756241 38685275 ~ 38702608 (-)
LOC110509133 LOC106592421 coding downstream 785628 38657804 ~ 38673221 (-)
LOC110509132 LOC106596853 coding downstream 814099 38574717 ~ 38644750 (-)
LOC110509127 LOC106596915 coding downstream 1462627 37766370 ~ 37996222 (-)
LOC110509123 LOC106596905 coding downstream 1853969 37578708 ~ 37645494 (-)
LOC110509137 LOC105025287 coding upstream 118757 39577116 ~ 39621092 (-)
LOC118944811 NA coding upstream 120234 39579694 ~ 39582551 (-)
rab31 rab31 coding upstream 177003 39633741 ~ 39650366 (-)
LOC118944836 ralbp1 coding upstream 255168 39714554 ~ 39717684 (-)
LOC110509148 LOC106596679 coding upstream 260237 39719697 ~ 39763225 (-)
G2136044 NA non-coding downstream 9479 39445533 ~ 39449370 (-)
G2136045 NA non-coding downstream 30757 39424964 ~ 39428092 (-)
G2136040 NA non-coding downstream 32106 39424206 ~ 39426743 (-)
G2136011 LOC106596709 non-coding downstream 76581 39380384 ~ 39382268 (-)
G2136010 NA non-coding downstream 78749 39379863 ~ 39380100 (-)
G2136060 NA non-coding upstream 8827 39468287 ~ 39468686 (-)
G2136062 NA non-coding upstream 16600 39476060 ~ 39476768 (-)
G2136031 NA non-coding upstream 19499 39478959 ~ 39479994 (-)
G2136067 NA non-coding upstream 32457 39491917 ~ 39492228 (-)
G2136068 NA non-coding upstream 37854 39497314 ~ 39497544 (-)
G2135837 NA other downstream 452799 39005461 ~ 39006050 (-)
G2135034 LOC106596897 other downstream 931929 38519571 ~ 38526920 (-)
G2134625 NA other downstream 1328442 38128129 ~ 38130407 (-)
LOC110509111 LOC106597319 other downstream 2901396 36526794 ~ 36557532 (-)
LOC110509145 ankrd12 other upstream 344335 39778552 ~ 39829207 (-)
G2136189 NA other upstream 483693 39943153 ~ 39945834 (-)
LOC110508256 LOC106596607 other upstream 531103 39973367 ~ 40103148 (-)
G2136243 NA other upstream 592179 40051639 ~ 40121899 (-)
G2137086 NA other upstream 955843 40415303 ~ 40415540 (-)

Expression


Co-expression Network