G2136028


Basic Information

Item Value
gene id G2136028
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 39622992 ~ 39625417 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2442640
AATAAGCACATAACGATATGTGTGATATATCAGCACTTCAAGTGCAGTAACTGTAAAGTTAAACTCTGTCTGAACCCTGGATGGCAGCAGGAAATACATGTTGTCCTCTCATCTCTGATTGGATAATGCAGGCCAATTGAATTGGAATTTAGGCTACAGTATATCCTGATTTGACAGTTGTTGACATGTAATTGACCCTGAACTCTGTGAGCAACTACTGTGACCTAGAGAAATATTTGACCTTCATGCACTGTAATTATTTTTTAGTAAACACttactacactcacacacacacacacacacacacacacacacacaccattcctcCATGTTTGACCTCTccttacatttatttaactaggcaagtccgttaagaacaaattcttattttacaatggcgggcctacaccggccaaaccctcccctaacccggacgactctgggccaaccgatcacggccggttgtgatatagtccgggatcaaaccagggtctgtagtgacgcctctagctctgagatgcagtgccttaggcctccgctgcgccacccgggaaACCAAATGTTGCTTTAACAGATTTGTCAGAGAGGTTGTCCTATTTAGTGAAGGTATTGGTCTCTGGCCATTGGGAATACTGTAAATAGATGGAAAGAGACTGAGTGGGGCTTCAGCCTTACTCTACTCCGGATTACCCAACAGTTTACACATGCTGCAGGCAGGGGGGTCTGCACTGCCGCTCTGTCACGAAGATGGACATAACCCTAGTAAAGTTAACTGAAAGAGCTATCAACAAATTACCCATATTCCATAATTCAAGTAAAGTTAGCTGAATTACTGTAACTGTATCAACAAACTACCTAGGAATATAATAACCAAAAAacaagaaattaagaaatatcagaatgagcaatatcagaatgagcaatgtcagaatCCTGAATATACAGTAagcggacagtttattaggtacacccatctattATCgggtcagacccccccccccatttgccTCCAAAACAACCTGAATTATtaggggcatggattctacaacgCGTCGGAAACATTTGTTTCTCAatttggtatcaagggacctaatgtgtgacaggaaaacattccccacaccagtacaccaccgccaccagcctgccgccacttcttcttcttcttgttacTTAGCTGAtaaggagtggaacccggtgagGTCGTCTGCTGCAAATAGCCAATCCATAacaaggaccgacgagttgtgcgttctgtgatgccgttctgcacaccacaccacacaccaatcGAGGGggaaaatgaacggagcaaagtacagagagatccttgatgaaaacctgcttctgaccgctcaggacctcagactggggcgaaggttcaccttccaacaggacaacaaccctaagcacaaagccaagacagcgcaggagtagcttcgggacaagtctctgaatgtccttgagtggcccagccagagcccagacttgaacccgatcgaacatctctggagagacctgaaaataactgtgcagcgacgctccccatccaacctgacagagcttgagaggatctgcagagaagaatgggagaaactccccaaatacaggtgtgccaagctggtagcgtcatacccaagcagactcgaggctgtaatcgctgccaaaggtgcttcaacaaaaaactgagtaaagggtcaaaATACTTCTGTAAATATGATatgttTTTGTCActaaggggtattgtgatgtcattaaggggtattgtgatgtcattaagtggtattgtgatgtcattatggggaattatgtaaatgtaatatgttTTTGTCActaaggggtattgtgatgtcattaaggggtattgtgatgtcattaaggggtattgtgatgtcattatggggaattatgtaaatgttatacttcattttattttttataaatgtttttgtaatttacccccttttctcccaaatgtcaatcttgtctcatcattGCAACTCCCCGACGGgctcgagtcatgcgtcctcggCAAACATGACCGGTCAAAACCTTGCTTCTTAACATCCGCCCgcctaacccggaagccagccgcacaaaTGCATTCACCTCGGTCGtttgcaggtgcccggcccgccacaatgagtcgctagagcgcgatgagccaagtaaagccctccCGGTCAAagcctcccctaacctggacgaagctgggccaattgtgagctgcCCTATGGCACTCCCGATCACGaacggttgtgacacagcccggATTAAACtcgagtctgtagtgacgccactagtgctgcgatacagtgccttagactgctgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2442640 True 2329 lncRNA 0.46 2 39622992 39625417

Neighbor

gene id symbol gene type direction distance location
LOC110509137 LOC105025287 coding downstream 1900 39577116 ~ 39621092 (-)
LOC118944811 NA coding downstream 40441 39579694 ~ 39582551 (-)
LOC118944870 LOC106596806 coding downstream 920384 38685275 ~ 38702608 (-)
LOC110509133 LOC106592421 coding downstream 949771 38657804 ~ 38673221 (-)
LOC110509132 LOC106596853 coding downstream 978242 38574717 ~ 38644750 (-)
rab31 rab31 coding upstream 11046 39633741 ~ 39650366 (-)
LOC118944836 ralbp1 coding upstream 89211 39714554 ~ 39717684 (-)
LOC110509148 LOC106596679 coding upstream 94280 39719697 ~ 39763225 (-)
LOC110509145 ankrd12 coding upstream 153135 39778552 ~ 39829207 (-)
ndufv2 ndufv2 coding upstream 217894 39843311 ~ 39869936 (-)
G2136097 NA non-coding downstream 165 39622581 ~ 39622827 (-)
G2136042 LOC106609167 non-coding downstream 26249 39593857 ~ 39596743 (-)
G2136094 NA non-coding downstream 50353 39572343 ~ 39572639 (-)
G2136091 NA non-coding downstream 52645 39569393 ~ 39570347 (-)
G2136035 NA non-coding upstream 620 39626037 ~ 39626705 (-)
G2136098 NA non-coding upstream 2353 39627770 ~ 39628147 (-)
G2136103 NA non-coding upstream 26268 39651685 ~ 39713832 (-)
G2136105 NA non-coding upstream 41623 39667040 ~ 39690030 (-)
G2135837 NA other downstream 616942 39005461 ~ 39006050 (-)
G2135034 LOC106596897 other downstream 1096072 38519571 ~ 38526920 (-)
G2134625 NA other downstream 1492585 38128129 ~ 38130407 (-)
LOC110509127 LOC106596915 other downstream 1683149 37766370 ~ 37996222 (-)
LOC110509111 LOC106597319 other downstream 3065539 36526794 ~ 36557532 (-)
G2136189 NA other upstream 317736 39943153 ~ 39945834 (-)
LOC110508256 LOC106596607 other upstream 365146 39973367 ~ 40103148 (-)
G2136243 NA other upstream 426222 40051639 ~ 40121899 (-)
G2137086 NA other upstream 789886 40415303 ~ 40415540 (-)

Expression


Co-expression Network