G2136276


Basic Information

Item Value
gene id G2136276
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 40138267 ~ 40140732 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2443051
agttaagggcttgtaagtaagcatttcactgtaaggtctacaacttgttgtattcagcatttcactgtaaaggtctactcttgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtaaaggtctactcttgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtcaggtctactacacctgttgtattcagcatttcactgtatggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtgaagtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtcaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtcaggtctactacacctgttgtattcagcatttcactgtcaggtctactacacctgttgtattcagcatttcactgtcaggtctactacacctgttgtattcagcatttcactgtcaggtctactacacctgttgtattcagcatttcactgtcaggtctactacacctgttgtattcagcatttcactgtcaggtctactacacctgttgtattcagcatttcactgtcaggtctactacacctgttgtattcagcatttcactgtcaggtctactacacctgttgtattcagcatttcactgtaaggtctacaacttgttgtattcagcatttcactgtaaggtctacaacttgttgtattcagcatttcactgtaaggtctacaacttgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctacaacttgttgtattcagcatttcactgtaaggtctacaacttgttgtattcagcatttcactgtaaggtctacaacttgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtcaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcattttactgtaaggtctacctacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtcaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcacggtaaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtcaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttaactgtgaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcagcatttcactgtaaggtctactacacctgttgtattcaggatttcactgtaaggtctactacacctgttgtattcagcatttcactgtgaggtctactacacctgttgtattcagcatttcactgtaaggtctacctacacctgttgtattcagcatttcactgtgaggtctacctaca

Function

NR:

description
PREDICTED: uncharacterized protein LOC106608566

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2443051 True 2120 lncRNA 0.40 3 40138267 40140732

Neighbor

gene id symbol gene type direction distance location
LOC110509140 LOC106596615 coding downstream 11066 40115401 ~ 40127201 (-)
LOC110508256 LOC106596607 coding downstream 35119 39973367 ~ 40103148 (-)
ndufv2 ndufv2 coding downstream 268331 39843311 ~ 39869936 (-)
LOC110509145 ankrd12 coding downstream 309060 39778552 ~ 39829207 (-)
LOC110509148 LOC106596679 coding downstream 375042 39719697 ~ 39763225 (-)
LOC110508253 LOC106591876 coding upstream 27679 40168411 ~ 40317511 (-)
LOC110508251 gnal coding upstream 311584 40452316 ~ 40587932 (-)
LOC118944871 NA coding upstream 456528 40597260 ~ 40599320 (-)
LOC118944865 NA coding upstream 464484 40605216 ~ 40608134 (-)
zfyve9a LOC106930947 coding upstream 543659 40684391 ~ 40740806 (-)
G2136262 NA non-coding downstream 28466 40104646 ~ 40109801 (-)
G2136259 NA non-coding downstream 54053 40082993 ~ 40084214 (-)
G2136255 NA non-coding downstream 63559 40074372 ~ 40074708 (-)
G2136247 NA non-coding downstream 70296 40067214 ~ 40067971 (-)
G2136241 NA non-coding downstream 88734 40049276 ~ 40049533 (-)
G2136274 NA non-coding upstream 12873 40153605 ~ 40154931 (-)
G2136275 NA non-coding upstream 14463 40155195 ~ 40156240 (-)
G2136277 NA non-coding upstream 51262 40191994 ~ 40194404 (-)
G2136311 NA non-coding upstream 60195 40200927 ~ 40201199 (-)
G2136243 NA other downstream 16368 40051639 ~ 40121899 (-)
G2136189 NA other downstream 192433 39943153 ~ 39945834 (-)
G2135837 NA other downstream 1132217 39005461 ~ 39006050 (-)
G2137086 NA other upstream 274571 40415303 ~ 40415540 (-)
G2137111 NA other upstream 331356 40472088 ~ 40475701 (-)
G2137419 NA other upstream 1120068 41260800 ~ 41261271 (-)
LOC110509166 LOC106596257 other upstream 1489929 41630582 ~ 41641166 (-)
G2137555 NA other upstream 1590982 41731714 ~ 41736389 (-)

Expression


Co-expression Network