G2137111


Basic Information

Item Value
gene id G2137111
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 40472088 ~ 40475701 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2444112
ggggggggacctgatcctagataatAAGAAATAAGACTAGCGGGCCTCCCGGGGgccgcagtggttaagggctgtactgcagctccagctgtgccaccagagactctgggttcgcgcccaggctctgttgtaaccggccgcgaccgggaggtccatggggtgacgcacaattggcctagtgtcgcccgggttagggagggcttggtcggtagggatgtccttgtctcatcgcgcaccagcgactcctgtggcgggccgggcgcagtgcacgctaaccaaggttgccaggtgcacggtgtttcctccgacacattggtgcggctggcttccgggttggatgcgcgctgtgttaagaagcagtgcggcttggttgggtatcggaggacgcatgactttcaaccttcgtctctcccgagcccgtacgggagttttagcgatgagacaagatagtagctactacaacaattggacaccacgaaattggggagaaaaaggggtaaaaattcaaaaaataaaagaatataaataaataattaagactagatggacaggggggacctgatcctagatcataataaacaagactag
>TU2444111
ggggggggacctgatcctagataatAAGAAATAAGACTAGCGGGCCTCCCGGGGgccgcagtggttaagggctgtactgcagctccagctgtgccaccagagactctgggttcgcgcccaggctctgttgtaaccggccgcgaccgggaggtccatggggtgacgcacaattggcctagtgtcgcccgggttagggagggcttggtcggtagggatgtccttgtctcatcgcgcaccagcgactcctgtggcgggccgggcgcagtgcacgctaaccaaggttgccaggtgcacggtgtttcctccgacacattggtgcggctggcttccgggttggatgcgcgctgtgttaagaagcagtgcggcttggttgggtatcggaggacgcatgactttcaaccttcgtctctcccgagcccgtacgggagttttagcgatgagacaagatagtagctactacaacaattggacaccacgaaattggggagaaaaaggggtaaaaattcaaaaaataaaagaatataaataaataattaagactagatggacaggggggacctgatcctagatcataataaacaagactagatggacaggggggacctgatcctagatcataataaataagactagatggacaggggggacctgatcctagatcataataaacaagactagatggacaggggggacctgaccctagatcataataaataagactagatggacaggggggacctgatcctagatcataataaataagactagatggacaggggggacctgatcctagataataataaataagactagatggacagggggg
>TU2444115
ggggggggacctgatcctagataatAAGAAATAAGACTAGCGGGCCTCCCGGGGgccgcagtggttaagggctgtactgcagctccagctgtgccaccagagactctgggttcgcgcccaggctctgttgtaaccggccgcgaccgggaggtccatggggtgacgcacaattggcctagtgtcgcccgggttagggagggcttggtcggtagggatgtccttgtctcatcgcgcaccagcgactcctgtggcgggccgggcgcagtgcacgctaaccaaggttgccaggtgcacggtgtttcctccgacacattggtgcggctggcttccgggttggatgcgcgctgtgttaagaagcagtgcggcttggttgggtatcggaggacgcatgactttcaaccttcgtctctcccgagcccgtacgggagttttagcgatgagacaagatagtagctactacaacaattggacaccacgaaattggggagaaaaaggggtaaaaattcaaaaaataaaagaatataaataaataattaagactagatggacaggggggacctgatcctagatcataataaacaagactagatggacaggggggacctgatcctagatcataataaataagactagatggacaggggggacctgatcctagatcataataaacaagactagatggacaggggggacctgaccctagatcataataaataagactagatggacaggggggacctgatcctagatcataataaataagactagatggacaggggggacctgatcctagataataataaataagactagatggacagggggg
>TU2444116
ggggggggacctgatcctagataatAAGAAATAAGACTAGCGGGCCTCCCGGGGgccgcagtggttaagggctgtactgcagctccagctgtgccaccagagactctgggttcgcgcccaggctctgttgtaaccggccgcgaccgggaggtccatggggtgacgcacaattggcctagtgtcgcccgggttagggagggcttggtcggtagggatgtccttgtctcatcgcgcaccagcgactcctgtggcgggccgggcgcagtgcacgctaaccaaggttgccaggtgcacggtgtttcctccgacacattggtgcggctggcttccgggttggatgcgcgctgtgttaagaagcagtgcggcttggttgggtatcggaggacgcatgactttcaaccttcgtctctcccgagcccgtacgggagttttagcgatgagacaagatagtagctactacaacaattggacaccacgaaattggggagaaaaaggggtaaaaattcaaaaaataaaagaatataaataaataattaagactagatggacaggggggacctgatcctagatcataataaacaagactagatggacaggggggacctgatcctagatcataataaataagactagatggacaggggggacctgatcctagatcataataaacaagactagatggacaggggggacctgaccctagatcataataaataagactagatggacaggggggacctgatcctagatcataataaataagactagatggacaggggggacctgatcctagataataataaataagactagatggacagggggg
>TU2444114
ggggggggacctgatcctagataatAAGAAATAAGACTAGCGGGCCTCCCGGGGgccgcagtggttaagggctgtactgcagctccagctgtgccaccagagactctgggttcgcgcccaggctctgttgtaaccggccgcgaccgggaggtccatggggtgacgcacaattggcctagtgtcgcccgggttagggagggcttggtcggtagggatgtccttgtctcatcgcgcaccagcgactcctgtggcgggccgggcgcagtgcacgctaaccaaggttgccaggtgcacggtgtttcctccgacacattggtgcggctggcttccgggttggatgcgcgctgtgttaagaagcagtgcggcttggttgggtatcggaggacgcatgactttcaaccttcgtctctcccgagcccgtacgggagttttagcgatgagacaagatagtagctactacaacaattggacaccacgaaattggggagaaaaaggggtaaaaattcaaaaaataaaataatataaataaataattaagactagatggacaggggggacctgatcctagataataataaataagactagatggac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2444112 False 588 TUCP 0.55 3 40472088 40475701
TU2444111 False 826 TUCP 0.52 2 40472255 40475701
TU2444115 False 826 TUCP 0.52 2 40472255 40475701
TU2444116 False 826 TUCP 0.52 2 40472255 40475701
TU2444114 True 594 lncRNA 0.54 2 40474883 40475701

Neighbor

gene id symbol gene type direction distance location
LOC110508253 LOC106591876 coding downstream 157372 40168411 ~ 40317511 (-)
LOC110509140 LOC106596615 coding downstream 347682 40115401 ~ 40127201 (-)
LOC110508256 LOC106596607 coding downstream 371735 39973367 ~ 40103148 (-)
ndufv2 ndufv2 coding downstream 604947 39843311 ~ 39869936 (-)
LOC110509145 ankrd12 coding downstream 645676 39778552 ~ 39829207 (-)
LOC118944871 NA coding upstream 121559 40597260 ~ 40599320 (-)
LOC118944865 NA coding upstream 129515 40605216 ~ 40608134 (-)
zfyve9a LOC106930947 coding upstream 208690 40684391 ~ 40740806 (-)
LOC118944846 NA coding upstream 272815 40748516 ~ 40750815 (-)
LOC110509159 LOC106596360 coding upstream 276577 40752278 ~ 40758925 (-)
G2137108 NA non-coding downstream 7414 40459142 ~ 40467469 (-)
G2137056 NA non-coding downstream 23254 40450435 ~ 40451629 (-)
G2137092 NA non-coding downstream 51820 40422365 ~ 40423063 (-)
G2137088 NA non-coding downstream 55828 40418854 ~ 40419055 (-)
G2137087 NA non-coding downstream 58689 40415982 ~ 40416194 (-)
G2137120 NA non-coding upstream 25654 40501355 ~ 40508755 (-)
G2137130 NA non-coding upstream 54562 40530263 ~ 40533398 (-)
G2137139 NA non-coding upstream 84219 40559920 ~ 40560297 (-)
G2137144 NA non-coding upstream 96186 40571887 ~ 40572198 (-)
G2137179 NA non-coding upstream 147858 40623559 ~ 40623874 (-)
G2137086 NA other downstream 59343 40415303 ~ 40415540 (-)
G2136243 NA other downstream 352984 40051639 ~ 40121899 (-)
G2136189 NA other downstream 529049 39943153 ~ 39945834 (-)
G2137419 NA other upstream 785099 41260800 ~ 41261271 (-)
LOC110509166 LOC106596257 other upstream 1154960 41630582 ~ 41641166 (-)
G2137555 NA other upstream 1256013 41731714 ~ 41736389 (-)
G2137648 LOC106596196 other upstream 1335094 41810795 ~ 41814201 (-)
G2137814 LOC106597294 other upstream 1745221 42220922 ~ 42226965 (-)

Expression


Co-expression Network