G2137453


Basic Information

Item Value
gene id G2137453
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 41323830 ~ 41325491 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2444549
gtagagtgaagtgaagtgttgtagagtgaagtgttgtagagtgaagtgaagtgttgtagagtgaagtgttgtagagtgaggtgttgtagagtgaagtgttgtagagtgaagtgaAGTGTTGTATATTGAAGTGTTGCAaagtgaagtgttgtagagtgaagtgttgtagagtgaagagttgtagagtgaagtgttgtagagtgaagaGTTGAAGAGTGAAGAGTTGTAGAGTaaagtgttgtagagtgaaggGGTGTAGAGTGAAGTGAAGTGTTGAAAATTGAAGTGTTGTAAAGTGAAGTGTTGTAATGTGAAGTGCTgtagagtgaagtgttgtagagtgaagtgttgtagagtgaagtgttgtagagtgaagtgttgtagagtgaagtgttgtagagtgaagtgttgtagagtgaagtgttgtagagtgaagtgaagtgttgtagagtgaagtgaagtgttgtagagtgaagtgaagtgttgtagagtgaagtgttgtagagtgagGTGTTGTAGAGTGAGgtgttgtagagtgaagtgttgtagagtgaagtgttgtagagtgaagtgttgtagagtgaagtgttgtagagtgaagtgttgtagagtgaagtgttgtagagtgaagtgttgtagagtgaagtgaAGTGTTGCAAATTGAAGTGTTGCAaagtgaagtgttgtagagtgaagtgttgtagagtgaagtgttgtagagtgaagagttgtagagtgaagtgttgtagagtgaagaGTTGTAGAGTGAAGTGAAGTGTTGCagagtgaagtgttgtagagtgaagtgttgtagagtgaagtgaAGTGTTGTCAATTGAAGTGTTATaagtgaagtgttgtagagtgaagagttgtagagtgaagtgttgCAGAGTGAAGTGTTGTAtagtgaagtgttgtagagtgaagtgttgtagagtgaagtgttgtagagtgaagtgttgtagagtgaagtgttgtAAAGTGAAGTGTTGTAcagtgaagtgttgtagagtgaagtgttgtagagtgaagtgttgtagaATGAAGTGTTGTAGAatgaagtgttgtagagtgaagtgttgtagagtgaagtgttgtagagtgaagtgttgtagagtgaagtgttgtagagtgaagtATTGTAAAGTTaagtgaagtgttgtagagtgaagtgtttgatagtgaagtgttgtagagtgaagtgttgtagagggaagtgttgtagagtgaagagttgtagagtgaagtgttgtGAAATGTTGAAGAGTGAAATGTTGTAGAGTGATGTGTTGTGAAGGgttgtagagtgaagtgttgACGTGTGAAAtgttgtagagtgaagtgttgtGAAGTGTTGTATAGTGAATAATTATGAAATGATGTTGAgtaggactaaaccctgactgtgatgtgaagtgttgtagagtgaataattgtgaagtgttgtag

Function

NR:

description
Transcriptional-regulating factor 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2444549 True 1452 lncRNA 0.39 2 41323830 41325491

Neighbor

gene id symbol gene type direction distance location
ak5 LOC102787869 coding downstream 123670 41051071 ~ 41200160 (-)
LOC110509157 dnajb4 coding downstream 451620 40867279 ~ 40872210 (-)
LOC110508261 dnajb4 coding downstream 480963 40783606 ~ 40842867 (-)
LOC110509159 LOC106596360 coding downstream 564905 40752278 ~ 40758925 (-)
LOC118944846 NA coding downstream 573015 40748516 ~ 40750815 (-)
LOC118944905 NA coding upstream 207123 41532614 ~ 41532745 (-)
LOC110509161 rs8 coding upstream 207480 41532971 ~ 41536197 (-)
LOC118944899 NA coding upstream 209001 41534492 ~ 41534560 (-)
si:ch211-106k21.5 LOC106596230 coding upstream 226499 41551990 ~ 41568745 (-)
znf414 znf414 coding upstream 261808 41587299 ~ 41626840 (-)
G2137451 NA non-coding downstream 5742 41317864 ~ 41318088 (-)
G2137449 NA non-coding downstream 6642 41316664 ~ 41317188 (-)
G2137448 NA non-coding downstream 7317 41316303 ~ 41316513 (-)
G2137444 NA non-coding downstream 12678 41310927 ~ 41311152 (-)
G2137438 NA non-coding downstream 32251 41291219 ~ 41291579 (-)
G2137495 NA non-coding upstream 89004 41414495 ~ 41426910 (-)
G2137507 NA non-coding upstream 127624 41453115 ~ 41453626 (-)
G2137540 NA non-coding upstream 180025 41505516 ~ 41506592 (-)
G2137576 NA non-coding upstream 244253 41569744 ~ 41569993 (-)
G2137578 NA non-coding upstream 247909 41573400 ~ 41573613 (-)
G2137419 NA other downstream 62559 41260800 ~ 41261271 (-)
G2137111 NA other downstream 848129 40472088 ~ 40475701 (-)
G2137086 NA other downstream 908290 40415303 ~ 40415540 (-)
G2136243 NA other downstream 1201931 40051639 ~ 40121899 (-)
LOC110508256 LOC106596607 other downstream 1326784 39973367 ~ 40103148 (-)
LOC110509166 LOC106596257 other upstream 305170 41630582 ~ 41641166 (-)
G2137555 NA other upstream 406223 41731714 ~ 41736389 (-)
G2137648 LOC106596196 other upstream 485304 41810795 ~ 41814201 (-)
G2137814 LOC106597294 other upstream 895431 42220922 ~ 42226965 (-)
G2138294 LOC106594920 other upstream 1023725 42349216 ~ 42351452 (-)

Expression


Co-expression Network