G2137660 (LOC106596213)


Basic Information

Item Value
gene id G2137660
gene name LOC106596213
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 41844082 ~ 41852435 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2444797
CACTGTTTGGTCCAGCCACTTCCACTGGCCTAGGTGTGTTTTGTACAGGCCAATCCAGAAGGAGGAGGAGCTGTCTTTCAGAAACTCCACGTTGCTCTTTATGAAGCGGAGTTCTTCAGGATCCTCGATGCTCACCAGAGACGCCCCTTTACGTATACAGCTGGTGGAGGCGTCGGCCCACTCTATGTGGTTAATGACGAAGCTGTAGCAGTGCCCTCTGAAAGGCAACCAGAACCAGGGGCTGTTGCTACCACtgttctcctcctgctcctcctggaTACATTCCCCGGTGTACTGGGGTGGGGCCGTGGGCGGGACGGCTGGGGACTGCTTACACACACTGGGGTAGGTGTGGTTACAAAGGGCTGTCTTCCAGGTGCCTTCCACATCCAGGTAGACACAGGGCCGGTCTCTGCTGGGCTCGTCTTGGGCCCACCGGTCCATGCTCAAGGGCCAGCCGTCCATCCACCTGAAGTAGCCTTGCGTCTCATTCCTATTGAGTCCAATCCACAGTGGTGTCTGCAGCTTCAAAGCCTGCAGCTCCAGGTAGGCTGCTGACAGTTCATCCAGGGTGCTAGCCAGCTGGCCCTCCTCAGCCTCACACTGCATCCGGGCTTCGGGCCATGTCCTGTTCTGGGGCAGCACCTTGTAGGAGTCGTTGGCCAGCTTCACCCAGCCTCTAGGTAACACTGTCGGTGTCGGGACTGGGATGCCTGAGTCAACTTTACGCTGACAGATGAAGCCGTGTGTGTCGTTGCAGGAACTGATTTCCCATTTTCCCAAGATGGAGGAGGAA

Function

NR:

description
macrophage mannose receptor 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2444797 True 796 lncRNA 0.57 6 41844082 41852435

Neighbor

gene id symbol gene type direction distance location
LOC110509166 LOC106596257 coding downstream 202916 41630582 ~ 41641166 (-)
znf414 znf414 coding downstream 217242 41587299 ~ 41626840 (-)
si:ch211-106k21.5 LOC106596230 coding downstream 275337 41551990 ~ 41568745 (-)
LOC110509161 rs8 coding downstream 307885 41532971 ~ 41536197 (-)
LOC110508267 LOC106596213 coding upstream 54347 41906782 ~ 42137364 (-)
cfap410 cunh21orf2 coding upstream 508312 42360747 ~ 42368140 (-)
LOC118944818 NA coding upstream 517430 42369865 ~ 42370480 (-)
LOC110509173 NA coding upstream 548080 42400515 ~ 42410701 (-)
LOC110509174 them6 coding upstream 619456 42471891 ~ 42493837 (-)
G2137652 LOC106596213 non-coding downstream 9548 41824342 ~ 41834534 (-)
G2137639 NA non-coding downstream 87865 41755994 ~ 41756217 (-)
G2137636 NA non-coding downstream 95014 41748668 ~ 41749068 (-)
G2137632 NA non-coding downstream 100822 41742821 ~ 41743260 (-)
G2137626 NA non-coding downstream 136782 41706937 ~ 41707300 (-)
G2137662 NA non-coding upstream 3017 41855452 ~ 41856489 (-)
G2137663 NA non-coding upstream 29523 41881958 ~ 41882358 (-)
G2137667 NA non-coding upstream 44408 41896843 ~ 41897346 (-)
G2137671 NA non-coding upstream 45934 41898369 ~ 41901209 (-)
G2137677 NA non-coding upstream 52755 41905190 ~ 41906407 (-)
G2137648 LOC106596196 other downstream 29881 41810795 ~ 41814201 (-)
G2137555 NA other downstream 107693 41731714 ~ 41736389 (-)
G2137419 NA other downstream 582811 41260800 ~ 41261271 (-)
G2137111 NA other downstream 1368381 40472088 ~ 40475701 (-)
G2137814 LOC106597294 other upstream 368487 42220922 ~ 42226965 (-)
G2138294 LOC106594920 other upstream 496781 42349216 ~ 42351452 (-)
emilin2a LOC106595984 other upstream 1522312 43343531 ~ 43398034 (-)

Expression


Co-expression Network