G2137677


Basic Information

Item Value
gene id G2137677
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 41905190 ~ 41906407 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2444820
TTAGGCAAAGTCATATTTACAAGCTTATAAAATAATCAACAAATTCATTGGACCAGCGCCATTGCTAACTAGTTTCGCTGATGTTTCGAATTTATCCCCATTTATGCAAAGACTTCTGGGATATTAGAATCCTCATGTCTCGACCTTCACATATTGCACCTAGGAATCAGGGGATGTGCGGTGAGGTCTGAGGCCGGTTAGGCACTTTCTATTGGACCAGCTGCAGTAACTCTCTCGCATTGGGGACAGTGTGTGTCAGGTCATGCTGGAACAAGAAGCTGAGAAGCTGTCTAGGTGATTTGTCTCTGTTGGTGAAATGTACAATCCCACAAGATCATCCTTAAAGGGATGcgtcgggattttggcaatgattgATACCATTTTTATTTCTCTATGTCCAGTATGAAGGGAGGTAGTTTcccgagccaatgctaactagaaTTAGCGcagtgactggaagtctatgtgTATCTGCTATCTAGAAGGAATGGTCATTGCGCTattgctagcagatacccatagacttccagtcgttGCGCTAatgcatgctagcagatacccatagacttccagttatTGCGCTAatgcatgctagcagatacccatagacttccagtcgttGCGCTAatgcatgctagcagatacccatagacttccagtcgttGCGCTAatgcatgctagcagatacccatagacttccagtagTTGCGCTAatgcatgctagcagatacccatagacttccagtagTTGCGCTAatgcatgctagcagatacccatagacttccagtagTTGCGCTAatgcatgctagcagatacccatagacttccagtagTTGCGCTAatgcatgctagcagatacccatagacttccataGGCTCCATGAACATTTTGAACCAGATCACTGCAGAAAAAAACATGTCATGTGACTATAGGATTTGACGTTATAATCGTTATAATGTGTTTTACtgtattgaagctgttctgtgtTCATGTacactgagtacaccaaacattaggagGTTCCTAGTCTCCTCTACATCTtccacactgattgaagtggatttaacaagtgacatcaataagggatcatagctttggttaccctggttagtctgtcatggaaagagcatgttgtCCACAATGAACTGTGTTGTATCCAATAAAGGCTTCCCA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2444820 True 1175 lncRNA 0.43 2 41905190 41906407

Neighbor

gene id symbol gene type direction distance location
LOC110509166 LOC106596257 coding downstream 264024 41630582 ~ 41641166 (-)
znf414 znf414 coding downstream 278350 41587299 ~ 41626840 (-)
si:ch211-106k21.5 LOC106596230 coding downstream 336445 41551990 ~ 41568745 (-)
LOC110509161 rs8 coding downstream 368993 41532971 ~ 41536197 (-)
LOC110508267 LOC106596213 coding upstream 375 41906782 ~ 42137364 (-)
cfap410 cunh21orf2 coding upstream 454340 42360747 ~ 42368140 (-)
LOC118944818 NA coding upstream 463458 42369865 ~ 42370480 (-)
LOC110509173 NA coding upstream 494108 42400515 ~ 42410701 (-)
LOC110509174 them6 coding upstream 565484 42471891 ~ 42493837 (-)
G2137671 NA non-coding downstream 3981 41898369 ~ 41901209 (-)
G2137667 NA non-coding downstream 7844 41896843 ~ 41897346 (-)
G2137663 NA non-coding downstream 22832 41881958 ~ 41882358 (-)
G2137662 NA non-coding downstream 48701 41855452 ~ 41856489 (-)
G2137660 LOC106596213 non-coding downstream 52755 41844082 ~ 41852435 (-)
G2137729 NA non-coding upstream 6359 41912766 ~ 41916223 (-)
G2137741 NA non-coding upstream 42093 41948500 ~ 41949168 (-)
G2137748 NA non-coding upstream 52430 41958837 ~ 42010836 (-)
G2137749 NA non-coding upstream 60537 41966944 ~ 41975914 (-)
G2137751 NA non-coding upstream 68130 41974537 ~ 42040084 (-)
G2137648 LOC106596196 other downstream 90989 41810795 ~ 41814201 (-)
G2137555 NA other downstream 168801 41731714 ~ 41736389 (-)
G2137419 NA other downstream 643919 41260800 ~ 41261271 (-)
G2137111 NA other downstream 1429489 40472088 ~ 40475701 (-)
G2137814 LOC106597294 other upstream 314515 42220922 ~ 42226965 (-)
G2138294 LOC106594920 other upstream 442809 42349216 ~ 42351452 (-)
emilin2a LOC106595984 other upstream 1468340 43343531 ~ 43398034 (-)

Expression


Co-expression Network