G2138294 (LOC106594920)


Basic Information

Item Value
gene id G2138294
gene name LOC106594920
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 42349216 ~ 42351452 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2445575
CTGACagggtgggtgtgtttgtgtgtattcacCGTTGTCTGTTAGTTTGTCCAGCGGAGTGGGTCTTCCCCTCTGGGCTTCTCTGTGAAGTCTCTGACATGTCAAACACAGACCAGGGGGAAGAGTTAGTGGAGTGCCTTGAACCATGAAAGAGGGGCCAGAGACAATGCTGTCCAATGAGCAGCAGGATTCAGCGTCTGACTCTACGCCTCTTTCCGTCTGCCCCGTCACCTTTCCACCAATTACAGCCttcccctggctgactgacagctctagCGGTGGTGACCCACATTCTGAGACACTGTGGTTTCCATGGTGATGGTCAATCAGGTCATGATCCGTGGCCTCATCTGAGATCACGATGCTTGAGTCAGCAGAGTCCCAGTCGGGCCCTGTCCCTTCACCCTGCCCTCGCCgcctactactactcctcctcctcctcctcgtcatccCCGGCTGGGCAGCATGGTCACTGGAGCCCCAGGCTTCAGAGGCCTTGTTAGAGGCTGAGCGACTCAGTCTGGATGGACGCATGGAGCTTCCCCACCTCACACAATACTGCAGATTCAGCTGCAACACAGGGAGAGcattacacacacaaaccctGCAGATTCAGCTGCAACACAGGGGGATCACACCGCCTTGTTCTGGACCAGAACAAAAAGGTCTGAAGGAGAAGTAGCTAAATAGCTAGTTGCCATTTCAGACAGAAGATGTGGTAtattacatgtaaaaaaaaatatataaggcaatgtttatatgaccccctttcaaacAGTCCCTTATTTACCACTTTCTTGCAGGTATACCCCTTTTATACATATCAGTGGGTAACTAGCAGATTGGGAGGGGTGTTGTTAAAGTAACggcccagtgtttccagatttctatgaaatatgacctataattaattacaataccaaaaaaaacattgtttttcatTTCAAATTAGGGAGGTGTTTTAAACAATGGAAGTGTAAAACATCCACCTGCAAAAAAACAGAACCATTCTCACAGACCCAATTTCTGTATAATGGTTACAGGGTCTGAAAATGCAGCAATCTTGACTAGTTCTTTAGGTGGGTTTTAAATGTGTCATGTTTTTCTTTCGTCTTACCACTATCCCTTTCAATTACACAAAAAAAGCAGCCATAAATTTGTGGGATTTTGGTATGTGTATGAAAGGGATATAGTTAAAGACAACGATTTGTGAACTTTGCCTGGTGAAAAgcgatatcccaagtataaatactgtaaagtacacacactaaaggGTAAAACAATATGTTGAGTAAAAGGGTTTAGAAATGTGCAAACTTCAAGGTGTTGGGGATCAACGAAGAGGAACTTCTGCTGTCATGACTTACCAGGACCACCTATtcagatgtgccttttgttaacTAAACAAGGTGTTAAATGGAGGTGAAAAGGAGACACGAGTGGTACTTTAATGTTGTGCTTCTAGCTGCCTACCCTGATGTAGCCACCGGTCTCACCTCCTTGACTTCCTTGGTCTGTCGAATATTGAGACCTGTGAATAAAAGGACCAACTGTTTGCTGCCTAACTAGCTATTGCCACTAACGTTACTTCCGTCTGTTGTTGTTGCTAACAtgctgctagctaactagctattgcCACTAACGTTACTTCCGTCTGTTGTTGTTGCTAACAtgctgctagctaactagctattgcCACTAACGTTACTTCCATCTGTGGTTGTTGCTAAcatgctgctagctagctaaggtaAATGACTGCACTGAAATCTTACCAGCTAGCTACAACAAATGTCCGAGCCAAACCAAATGATCTGCCTGGGATAGGTACAACACAACCTACAAAAACCTATACAGTAGCTAGTTAACTAAGCTAACTCAGTTAGCTAACTGTTTGTTGTGTTTATGTTAGCCATCAGGGTCAAAACAGTTACTGTATTAGCTGGCTAAAAGTTACTTACTGAGTCTCAAAATGTTCATAGTCTATCCGCTTAGAAAGAATCATCTCCGTGGTCTCCTGCTTTGAGCTTTTGCTAACTACCGTAACTAGATGTTTGAAAGTAACGGACGGCGAAGGAAAGCGGATTTCGGTTAGGACCGAGGCAGATTTCGGTTAGGATCGAGGCATATTTCGGTTAGGATCGAGGCAGATTTCGGTTAGTTTCGAGGCAGATTTCGGTTAGCTTCGAGGCAGCAACAACTCACCTCTCTCGCG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2445575 True 2215 TUCP 0.45 2 42349216 42351452

Neighbor

gene id symbol gene type direction distance location
LOC110508267 LOC106596213 coding downstream 211852 41906782 ~ 42137364 (-)
LOC110509166 LOC106596257 coding downstream 708050 41630582 ~ 41641166 (-)
znf414 znf414 coding downstream 722376 41587299 ~ 41626840 (-)
si:ch211-106k21.5 LOC106596230 coding downstream 780471 41551990 ~ 41568745 (-)
LOC118944899 NA coding downstream 814656 41534492 ~ 41534560 (-)
cfap410 cunh21orf2 coding upstream 9295 42360747 ~ 42368140 (-)
LOC118944818 NA coding upstream 18413 42369865 ~ 42370480 (-)
LOC110509173 NA coding upstream 49063 42400515 ~ 42410701 (-)
LOC110509174 them6 coding upstream 120439 42471891 ~ 42493837 (-)
them6 them6 coding upstream 146831 42498283 ~ 42508205 (-)
G2138287 LOC106596129 non-coding downstream 8145 42339661 ~ 42341071 (-)
G2138313 NA non-coding downstream 24450 42324317 ~ 42324766 (-)
G2137877 NA non-coding downstream 60887 42288008 ~ 42288329 (-)
G2137874 NA non-coding downstream 62610 42286403 ~ 42286606 (-)
G2137873 NA non-coding downstream 64838 42284163 ~ 42284378 (-)
G2138286 NA non-coding upstream 16792 42368244 ~ 42385423 (-)
G2138348 NA non-coding upstream 79837 42431289 ~ 42431644 (-)
G2138358 NA non-coding upstream 108977 42460429 ~ 42461528 (-)
G2138366 NA non-coding upstream 124018 42475470 ~ 42475859 (-)
G2138367 NA non-coding upstream 124991 42476443 ~ 42477643 (-)
G2137814 LOC106597294 other downstream 122251 42220922 ~ 42226965 (-)
G2137648 LOC106596196 other downstream 535015 41810795 ~ 41814201 (-)
G2137555 NA other downstream 612827 41731714 ~ 41736389 (-)
G2137419 NA other downstream 1087945 41260800 ~ 41261271 (-)
emilin2a LOC106595984 other upstream 1023295 43343531 ~ 43398034 (-)

Expression


Co-expression Network