G2138358


Basic Information

Item Value
gene id G2138358
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 42460429 ~ 42461528 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2445653
CTTATAGcccttccccttctattaatacaacataagaataatcaattattataatacatcaatcgTTTGGTGCAGCCCCTCTCATGACCCCAAGGTGAACCCCATCATTTGCATGTGCTAAATTACATTTGATTAAGGGCTGTGTAATTATTGACCTGGCAGTAAATCACCTCTAGTCCTTCACCAATAATTGTACTTTTTTAAAAGCAGGACGTTAAACTCGGATTTCTTTAATTGCAATATACAGATTAATATTTTTTACTTTCCAGGAGGTACTCCGAGATAGACCATCTTCTTTAAAACTTGTTTGTGTGGGCCCACTTGAACTGACCCCATGGCTGTGACAATGTCAATCCCCCACTGCTCATTACTCTTCCTGGTCTGCCCTCCCATCAGTAGGATGGGTTTACAGCCGCGTGCATGCAACGGCTGCGCCTGGAACACAAACATTAACAGCCCACATGTCTCATCTTTACAACGTAAACCAGTGTTTGGATGAATTGGCTCTAGAACAACATGCTCCAACTGTATGCCTACACAAGCATCCATCTGTCCTATGGTGACACAGCTGTCCGTCTGCCCTTAGTTGAATTCAATCATTTCATTTCATATTGCCCTGGTGCCTGGTGCATCTGTATTAGATGTTTTATCACATGataaaacatttcaaaaataGCATTTTCAAACAACCCGTCTCAAACTGCAGAGCCATCAAAAAGTGCCAGAATTATAGGCTTCATGTTCTTGACTGTACAGTTTAGTGCAGCAGGAATGTGTATCATGACTCAGTGTTGTAGTATTGAGACAGGAATGCATACCAGGGTTCAGTCTTGAATACCAGGGGCCGAGGTGTTTCAGGGTTCAGTCTTGAATACCAGGGGTCGAGGTGTTTCAGGGTTCAGTCTTGAATACCAGGGGCCAAGGTGTTTCAGGGTTCACTCTTGAATACCAGGGGCTGAGGTGTTTCAGGGTTCCGTCTTGAATACCAGGGGCTGAGGTGTTTCAGGGTTCACTCTTGAATACCAGGGGCTGAGGTGTTTCAGGGTTCACTCTTGAATACCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2445653 True 1063 lncRNA 0.44 2 42460429 42461528

Neighbor

gene id symbol gene type direction distance location
LOC110509173 NA coding downstream 49728 42400515 ~ 42410701 (-)
LOC118944818 NA coding downstream 89949 42369865 ~ 42370480 (-)
cfap410 cunh21orf2 coding downstream 92289 42360747 ~ 42368140 (-)
LOC110508267 LOC106596213 coding downstream 323065 41906782 ~ 42137364 (-)
LOC110509166 LOC106596257 coding downstream 819263 41630582 ~ 41641166 (-)
LOC110509174 them6 coding upstream 10363 42471891 ~ 42493837 (-)
them6 them6 coding upstream 36755 42498283 ~ 42508205 (-)
LOC110508271 NA coding upstream 168617 42625607 ~ 42703120 (-)
LOC110509177 LOC106597278 coding upstream 272115 42733643 ~ 42772837 (-)
LOC110508296 pde1c coding upstream 415968 42877496 ~ 42959408 (-)
G2138348 NA non-coding downstream 28785 42431289 ~ 42431644 (-)
G2138286 NA non-coding downstream 75006 42368244 ~ 42385423 (-)
G2138287 LOC106596129 non-coding downstream 119358 42339661 ~ 42341071 (-)
G2138313 NA non-coding downstream 135663 42324317 ~ 42324766 (-)
G2137877 NA non-coding downstream 172100 42288008 ~ 42288329 (-)
G2138366 NA non-coding upstream 13942 42475470 ~ 42475859 (-)
G2138367 NA non-coding upstream 14915 42476443 ~ 42477643 (-)
G2138386 NA non-coding upstream 60786 42522314 ~ 42522784 (-)
G2138414 NA non-coding upstream 138153 42599681 ~ 42600138 (-)
G2138420 NA non-coding upstream 149529 42611057 ~ 42615032 (-)
G2138294 LOC106594920 other downstream 108977 42349216 ~ 42351452 (-)
G2137814 LOC106597294 other downstream 233464 42220922 ~ 42226965 (-)
G2137648 LOC106596196 other downstream 646228 41810795 ~ 41814201 (-)
G2137555 NA other downstream 724040 41731714 ~ 41736389 (-)
emilin2a LOC106595984 other upstream 913219 43343531 ~ 43398034 (-)

Expression


Co-expression Network