G2138540


Basic Information

Item Value
gene id G2138540
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 42903457 ~ 42910028 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2445931
ctcctctgtcctgatcccctattagttcctgtcctctcctctgtcctgatcctctattagttcctgtcctctcctctgtcctgatcctctattagttcctgtcctctcctctgtcctgatcctctattagttcctgttctctcctctgtcctgatcctctattagttcctgtcctctcctctgttctgatcctctattagttcctgtcctctcctctgtcctgatcccctattagttcctgtcctctcctctgtcctgatcctctattagttccttgtcctctcctctgtcctgatcctctattagttcctgttctctcctctgtcctgatcctctattagttcctgtcctctcctctgtcctgatcctatattagttcctctcctctgtcaccactgtcctctcctctattagttcctgtcctctcctctgtcctgatcctctattagttcctgtcctctcctctgtcctgatcctctattagttcctgtcctctcctctgtcctgaacctctattcgttcctgtcctctcatctgtcctgatcctctattagttcctgtcctctcatctgtcctgatcctctattagttcctgttctctcctctgtcctgatcctctattagttcctgtcctctcctttgtcctgatcctctattagttcctgtcctccactctgtcaccactgtcctgatcctctattagttcctgtcctctcgtctgtcctgatcctctattagttcctgttctctccgctgtcctgatcctctattagttcctgttctctcctctgtcctgattctCTATAAGCCCTGtcctctcctttgtcctgatcctctattagttcctgtcctccactctgtcaccactgtcctgatcctctattagttcctgtcctctcgtctgtcctgatcctctattagttcctgttctctcctctgtcctgatcctctattagttcctgtcatctcctctgtcctgaccctctattagttcctgttctctgctctgccctgatcctctattagttcctgtcctctactctgtcatcactgtcctgatcctctattagttcctgttctctgctctgccctgatcctctattagtttctgtcctctcctctgtcctgatcctctattagttcctctctgtcaccactgtcctgatcctttattagttcctgtcctctcctctgtcctgatcctctattagttcctgttctctcctctgtcctgatcctctattagttcctgtcctctcctctgtcctgaacctctattcgttcctgtcctctcatctgtccCGATCCTCTATTAgatcctgttctctcctctgtcctgatcctcaattagttcctgtcctctcctctgccctgatcctctattagttcctgtcctctactctgtcagcactgtcctgatcctctattagtttctgtcctctcctctgtcctgatcctctattagttcctctctgtcaccactgtcctgatccGCTATtcgttcctgtcctctcatctgtccCGATCCTCTATTAgatcctgttctctcctctgtcctgatcctcaattagttcctgtcctctcctctgtcctgatcctctattagttcctctcctctgtcaccactgtcctgagcctctattagttcctgtcctctcctctgtcctgattctatattagttcctgtcctctcctctgtcctgatcctctattagttcctgtcctctcctctgtcctgatcctctattagttcctgtcctctcctctgttctgatcctctattagtttctgtcctctcctctgtcctgatccccctattagttcctgtcctctcctctgtcctgatcctctattagttccttgtcctctcctctgtcctgatcctctattagttcctgttctctcctctgtcctgatcctctattagttcctgtcctctcctctgtcctgatcctatattagttcctctcctctgtcaccactgtcctctcctctattagttcctgtcctctcctctgtcctgatcctctattagttcctgtcctctcctctgtcctgatcctctattagttcctgtcctctcctctgtcctgaacctctattcgttcctgtcctctcatctgtcctgatcctctattagttcctgtcctctcatctgtcctgatcctctattagttcctgttctctcctctgtcctgatcctctattagttcctgtcctctcctttgtcctgatcctctattagttcctgtcctccactctgtcaccactgtcctgatcctctattagttcctgtcctctcgtctgtcctgatcctctattagttcctgttctctgctctgccctgatcctctattagttcctgtcctctcatctgtcctgatcctctattagttcctgttctctccgctgtcctgatcctctattagttcctgtcctctcctctgtcctgaccctctattagttcctgttctctgctctgccctgatcctctattagttcctgtcctctactctgtcagcactgtcctgatcctctattagttcctgttctctgctctgccctgatcctctattagttcatgtcctctactctgtcagcactgtcctgatcctctattagtttctgtcctctcctctgtcctgatcctctattagttcctctcctctgtcaccactgtcctgatcctctattagttcctgtcctctcctctgtcctgatcctctattagttcctgtactctcctctgtcctgatcctctattagttcctgtcctctcctctgtcctgaacctctattcgttcctgtcctctcctctgtcctgatcctctattagttcatgttctctcctctgtcctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2445931 True 2859 lncRNA 0.48 3 42903457 42910028

Neighbor

gene id symbol gene type direction distance location
LOC110509177 LOC106597278 coding downstream 130620 42733643 ~ 42772837 (-)
LOC110508271 NA coding downstream 200337 42625607 ~ 42703120 (-)
them6 them6 coding downstream 395252 42498283 ~ 42508205 (-)
LOC110509174 them6 coding downstream 409620 42471891 ~ 42493837 (-)
LOC110509173 NA coding downstream 492756 42400515 ~ 42410701 (-)
LOC110509179 LOC105010334 coding upstream 63327 42973355 ~ 42987359 (-)
LOC118944838 LOC106596014 coding upstream 131194 43041222 ~ 43077460 (-)
emilin2a LOC106595984 coding upstream 433503 43343531 ~ 43398034 (-)
G2138525 LOC106597466 non-coding downstream 40914 42860602 ~ 42862543 (-)
G2138526 NA non-coding downstream 45050 42857351 ~ 42858407 (-)
G2138505 NA non-coding downstream 87507 42791440 ~ 42815950 (-)
G2138502 NA non-coding downstream 123287 42779211 ~ 42780170 (-)
G2138492 NA non-coding downstream 141117 42761874 ~ 42762340 (-)
G2138543 NA non-coding upstream 8671 42918699 ~ 42921253 (-)
G2138593 NA non-coding upstream 128189 43038217 ~ 43039942 (-)
G2138601 NA non-coding upstream 174047 43084075 ~ 43084938 (-)
G2138634 NA non-coding upstream 220861 43130889 ~ 43131310 (-)
G2138598 atp6v1h non-coding upstream 245049 43155077 ~ 43156881 (-)
G2138294 LOC106594920 other downstream 552005 42349216 ~ 42351452 (-)
G2137814 LOC106597294 other downstream 676492 42220922 ~ 42226965 (-)
G2137648 LOC106596196 other downstream 1089256 41810795 ~ 41814201 (-)
G2137555 NA other downstream 1167068 41731714 ~ 41736389 (-)
LOC110509166 LOC106596257 other downstream 1272074 41630582 ~ 41641166 (-)

Expression


Co-expression Network