G2138541


Basic Information

Item Value
gene id G2138541
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 42908268 ~ 42916566 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2445933
atcctctattagttcctgtcctctcctctgtcctcatcctctattagttcctgtcctctcctctgtcctaatcctctattagttcctgacctctcctctttcagcactgtcctgatcctctatttgttcctgtcctctcctctgtcctgaacctctattcgttcctgtcctctcctctgtcctgatcctttattagttcctgtcctctcctttgtcctgatcttctattagttcctgttctctcctctgtcctgatcctctattagttcctgtcctctcgtctgtcctgaacctctattagttcctgtcctctcctctgtcctgattctctattagttcctgttctctcctctgtcaccactgtcccgatcctctattagttcctgttctctcctctgtcagcactgtcctgatcctctatgagttcctgttctctcctctgtcaccactgtcctgatcctctattagttcctgtcctctcctctgtcaccactgtcctgatcctctattagttcctgtcctctccactgtcctgatcctctattagttcctgtcctctcgtctgtcctgaacctctattagttcctgtcctctcctctgtcctgatcctctattagttcctgtcctctcctctgtcctgatcctctattagtccctgtcctctcgtctgtcctgaacctctattagttcctgtcctctcctctgtcctgaacctctattagttcctgttctctactctgtcctgatcctctcttagttcctgtcctctcctctgttctgatcctctattagttcctgttccctcctctgtcagcactgtcctgatcctctattagttcctgtcctctcatctgtcctgatcctctattagttcctgtcctctcctctgtcctgatcccctattagttcctgttctctcctctgtcctgatcctctattagttcctgtcctctcctctgtcctgatcctctattagttcctgttctctcctctgtcctgatcctctattagttcctgtcctctcctctgttctgatcctctattagttcctgacctctcctctttcagcactgtcctgatcctctattagttcctgtcctctcctctgtcctgaacctctattagttcctgttctctcctctgtcctgatcctctattagttcctgtcctctcctctgttctgatcctctattagttcctgacctctcctctgtcagcactgtcctgatcctctattagttcctgtcctctcctctgccaccactgtcctgatcctctattagttcctgtcctctcctctgtcaccactgtcctgattctctattagttcctgttctctcctctgtcaccactgtcctgatGCTCTATtatttcctgtcctctcctctgtcctgatcctctaatagttcctgccctctcctctgtcctgatcctctattatttcctgtcctctcctctgtcctgatcctctattagttcctgtcctctcctctgtcctgatcctctattagttactgtcctctcctctgtcctgatcccctattagttcctgtcctctcctctgtcctgatcctctattagttcctgtcctctcctctgtcctgatcctctattagttcctgtcctctcctctgtcctgatcctctattagttcctgttctctcctctgtcctgatcctctattagttcctgtcctctcctctgttctgatcctctattagtttctgtcctctcctctgtcctgatccccctattagttcctgtcctctcctctgtcctgatcctctattagttccttgtcctctcctctgtcctgatcctctattagttcctgttctctcctctgtcctgatcctctattagttcctgtcctctcctctgtcctgatcctatattagttcctctcctctgtcaccactgtcctctcctctattagttcctgtcctctcctctgtcctgatcctctattagttcctgtcctctcctctgtcctgatcctctattagttcctgtcctctcctctgtcctgaacctctattcgttcctgtcctctcatctgtcctgatcctctattagttcctgtcctctcatctgtcctgatcctctattagttcctgttctctcctctgtcctgatcctctattagttcctgtcctctcctttgtcctgatcctctattagttcctgtcctccactctgtcaccactgtcctgatcctctattagttcctgtcctctcgtctgtcctgatcctctattagttcctgttctctccgctgtcctgatcctctattagttcctgttctctcctctgtcctgattctCTATAAGCCCTGtcctctcctttgtcctgatcctctattagttcctgtcctccactctgtcaccactgtcctgaacctctattagttcctgtcctctcgtctgtcctgatcctctattagttcctgttctctcctctgtcctgatcctctattagttcctgtcatctcctctgtcctgaccctctattagttcctgtcctctcctctgttctgatcctctattagttcctgacctctcctctgtcagcactgtcctgatcctctattagttcctgtcctctcctctgccaccactgtcctgatc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2445933 True 2627 lncRNA 0.48 4 42908268 42916566

Neighbor

gene id symbol gene type direction distance location
LOC110509177 LOC106597278 coding downstream 135431 42733643 ~ 42772837 (-)
LOC110508271 NA coding downstream 205148 42625607 ~ 42703120 (-)
them6 them6 coding downstream 400063 42498283 ~ 42508205 (-)
LOC110509174 them6 coding downstream 414431 42471891 ~ 42493837 (-)
LOC110509173 NA coding downstream 497567 42400515 ~ 42410701 (-)
LOC110509179 LOC105010334 coding upstream 56789 42973355 ~ 42987359 (-)
LOC118944838 LOC106596014 coding upstream 124656 43041222 ~ 43077460 (-)
emilin2a LOC106595984 coding upstream 426965 43343531 ~ 43398034 (-)
G2138525 LOC106597466 non-coding downstream 45725 42860602 ~ 42862543 (-)
G2138526 NA non-coding downstream 49861 42857351 ~ 42858407 (-)
G2138505 NA non-coding downstream 92318 42791440 ~ 42815950 (-)
G2138502 NA non-coding downstream 128098 42779211 ~ 42780170 (-)
G2138492 NA non-coding downstream 145928 42761874 ~ 42762340 (-)
G2138543 NA non-coding upstream 2133 42918699 ~ 42921253 (-)
G2138593 NA non-coding upstream 121651 43038217 ~ 43039942 (-)
G2138601 NA non-coding upstream 167509 43084075 ~ 43084938 (-)
G2138634 NA non-coding upstream 214323 43130889 ~ 43131310 (-)
G2138598 atp6v1h non-coding upstream 238511 43155077 ~ 43156881 (-)
G2138294 LOC106594920 other downstream 556816 42349216 ~ 42351452 (-)
G2137814 LOC106597294 other downstream 681303 42220922 ~ 42226965 (-)
G2137648 LOC106596196 other downstream 1094067 41810795 ~ 41814201 (-)
G2137555 NA other downstream 1171879 41731714 ~ 41736389 (-)
LOC110509166 LOC106596257 other downstream 1276885 41630582 ~ 41641166 (-)

Expression


Co-expression Network