G2138593


Basic Information

Item Value
gene id G2138593
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 43038217 ~ 43039942 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2446015
ATTGGTTCTGTCCCAGACTATAATACTATTGGTTCTGTCCCAGACTATAATACTATTGGTTCTGTCCCAGATTACTGTAAAACTTCTCCTGGATTAATCAGCTTGCAGCTCAATGGAAAATCTACCATTTTATTCCAGGAATAGACTGGAGTCTGGGAAACGGAGCCTCAACATTCAACAACAGCTTTTATCTTATAATTTTAAATATCAGATCTTTATTTTACATATGTTTGGTTATAGTTTAGATAGAAGtttctgttttgtttgttgtcATGCTGTAAATCTTCTTCTATGTTTGATGATGTGTTGAAGAGAGAGTTGTTTCGCtgtatgctctaaccactagactaagcTGAGAGAGTTGTTTCGCTctgcgctctaaccactagactacctgagagttgtttctctaaccactagactacgctGAGAGAGTTGTTTCTGTTCGTTGTTCTACTGTAAATCTCCTATGTTTGATGTGTTGAAGAGATAGTTatttctctaaccactaggctacactgtgAGAGTTATTTCTCTAACCACTCGGCCACACTGTGAGAGTTGTTTtctctaaccactagtctacactGAGAGTTgtttctctaaccactagtctacactGAGAGTTgtttctctaaccactagtctacactGAGTGTTGCGTCTCTCACGTGCAGATTATTATCATAATTTCATGAGTGACGGAACTCAAAGCAGCAAATGTATTTTTATAACAAATAGCTGTTGAATACCACAAAGTTACCACAATGTCACCTCACATATCCAGATTATAATATGTCAGCAATAGCAAATCAGGAACTAAATGTAATTAATCAGGAGTACTCAGATATTTGAGCAATTTATTTATTGATCATTGGTTGATGATCTGTGATAATCTGTTGTTGTACTGTTTGTGGTACATGTTGATCCGGCTTCTCTCTGTATGATATACAGTAAAGATTTGTAAATACTGTACCGATCTCACGGTACAGATCATGTTTATATGTATAACACTCTAAATCATGTTCTTCTAAAGACATTGTTGATTACAAACTAACAAGTAAGTAAATGGTAAAGAAAACTGTACATAACGAATACTGTTAAAGGCAGCTCCTGTTATCAATGTGTATTGTATATGttcttgttgtttttgttgtgagGATTTGGAATGTACATTATTAAATGATTCCTCTATGATAAACTGTCAAC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2446015 True 1209 lncRNA 0.36 5 43038217 43039942

Neighbor

gene id symbol gene type direction distance location
LOC110509179 LOC105010334 coding downstream 50858 42973355 ~ 42987359 (-)
LOC110508296 pde1c coding downstream 78809 42877496 ~ 42959408 (-)
LOC110509177 LOC106597278 coding downstream 265380 42733643 ~ 42772837 (-)
LOC110508271 NA coding downstream 335097 42625607 ~ 42703120 (-)
them6 them6 coding downstream 530012 42498283 ~ 42508205 (-)
LOC118944838 LOC106596014 coding upstream 1280 43041222 ~ 43077460 (-)
emilin2a LOC106595984 coding upstream 303589 43343531 ~ 43398034 (-)
G2138543 NA non-coding downstream 116964 42918699 ~ 42921253 (-)
G2138541 NA non-coding downstream 121651 42908268 ~ 42916566 (-)
G2138540 NA non-coding downstream 128189 42903457 ~ 42910028 (-)
G2138525 LOC106597466 non-coding downstream 175674 42860602 ~ 42862543 (-)
G2138526 NA non-coding downstream 179810 42857351 ~ 42858407 (-)
G2138601 NA non-coding upstream 44133 43084075 ~ 43084938 (-)
G2138634 NA non-coding upstream 90947 43130889 ~ 43131310 (-)
G2138598 atp6v1h non-coding upstream 115135 43155077 ~ 43156881 (-)
G2138650 NA non-coding upstream 147562 43187504 ~ 43190542 (-)
G2138651 NA non-coding upstream 149283 43189225 ~ 43191252 (-)
G2138294 LOC106594920 other downstream 686765 42349216 ~ 42351452 (-)
G2137814 LOC106597294 other downstream 811252 42220922 ~ 42226965 (-)
G2137648 LOC106596196 other downstream 1224016 41810795 ~ 41814201 (-)
G2137555 NA other downstream 1301828 41731714 ~ 41736389 (-)
LOC110509166 LOC106596257 other downstream 1406834 41630582 ~ 41641166 (-)

Expression


Co-expression Network