G2138601


Basic Information

Item Value
gene id G2138601
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 43084075 ~ 43084938 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2446024
cagactgggataaggattgattgaatatgtccttaaacacaccagccagctggtctgcgcatgttctgaggatgcggtcatgtttccggtcaccttgccctgattaaaagctgtggttcgcactttcagttttgctcaAATGCTGCCATAAATCCacgggaaggttttaatagtcgctgtgggtacaacatcaccgatgcacttgctaataaactcgctcaccaaatcagTGTATTCATCAAAGTTATTGTCcgacgctatgcggaacatatcccagtccaggtgatcgaagcaatcttgaagcgtggaatccgattggtcggaccaacattgaacagacctgagcacgggcgttacctgttttagtttctgtccaTAGGGTGGAACAACAAAATGGTGTCGTGGTCAAATCTTACGAAAGGGGGGCGgcggagggctttgtatgcattgcggaagttagaataacaatgatccattcgatatgctgatagaatttagggagtcttgttttcagattagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2446024 True 520 lncRNA 0.46 2 43084075 43084938

Neighbor

gene id symbol gene type direction distance location
LOC118944838 LOC106596014 coding downstream 6615 43041222 ~ 43077460 (-)
LOC110509179 LOC105010334 coding downstream 96716 42973355 ~ 42987359 (-)
LOC110508296 pde1c coding downstream 124667 42877496 ~ 42959408 (-)
LOC110509177 LOC106597278 coding downstream 311238 42733643 ~ 42772837 (-)
LOC110508271 NA coding downstream 380955 42625607 ~ 42703120 (-)
emilin2a LOC106595984 coding upstream 258593 43343531 ~ 43398034 (-)
G2138593 NA non-coding downstream 44133 43038217 ~ 43039942 (-)
G2138543 NA non-coding downstream 162822 42918699 ~ 42921253 (-)
G2138541 NA non-coding downstream 167509 42908268 ~ 42916566 (-)
G2138540 NA non-coding downstream 174047 42903457 ~ 42910028 (-)
G2138525 LOC106597466 non-coding downstream 221532 42860602 ~ 42862543 (-)
G2138634 NA non-coding upstream 45951 43130889 ~ 43131310 (-)
G2138598 atp6v1h non-coding upstream 70139 43155077 ~ 43156881 (-)
G2138650 NA non-coding upstream 102566 43187504 ~ 43190542 (-)
G2138651 NA non-coding upstream 104287 43189225 ~ 43191252 (-)
G2138653 NA non-coding upstream 110112 43195050 ~ 43208567 (-)
G2138294 LOC106594920 other downstream 732623 42349216 ~ 42351452 (-)
G2137814 LOC106597294 other downstream 857110 42220922 ~ 42226965 (-)
G2137648 LOC106596196 other downstream 1269874 41810795 ~ 41814201 (-)
G2137555 NA other downstream 1347686 41731714 ~ 41736389 (-)
LOC110509166 LOC106596257 other downstream 1452692 41630582 ~ 41641166 (-)

Expression


Co-expression Network