G2138859


Basic Information

Item Value
gene id G2138859
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 43444532 ~ 43448124 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2446317
ATATTTATCTTAAAAATATGACATGCTCATTACATCCTATGCAGGGAGGCCCACTGTCTCAGACTTTGAAAACACGTGGTACAGAGGTAAAATAGTTGTAAGGTATCTATACAGCACAGTCtataggtagactagtgttagTTTATAGACATCACAGTCTATATGTAGACTAGTGGTGGGGTTTATAGACAGAACAGTCTATAGGTAGACTAGTTTTAGAGTTTATAGACATCACAGTCTATATGTAGACTAGTGGTAGGGTTTATAGACAGAACAGTCTATAGGTAGACTAGTGCTAGGGTTTATAGACAGCACAGTCTataggtagactagtggtaggGTTTATAGACAGCACAGTCtataggtagactagtgttagAGTTTATAGACAGCACAGTCTATAGgtagactagtgttagAGTTTATAGACAGCACAGTAtataggtagactagtgttagAGTTTATAGACAGCACAGTCTataggtagactagtggtaggGTTTATAGACAGCACAGTCtataggtagactagtgttagAGTTTATAGACAGAACAGTCTATAGGTAGACTAGTGCTAGGGTTTATAGACATCACAGTCTATATGTAGACTAGTGGTAGGGTTTATAGACAGAACAGTCTATAGGTAGACTAGTGCTAGGGTTTATAGACAGCACAGTCTataggtagactagtggtaggGTTTATAGACAGCACAGTCtataggtagactagtgttagAGTTTATAGACAGCACAGTCtataggtagactagtggtaggGTTTATAGACAGCACAGTCTataggtagactagtggtaggGTTTATAGACAGCACAGTCTataggtagactagtggtaggGTTTATAGACAGCACAGTCTACACTTAGACTAGTGGTAGGGTTTATAGACAGCACAGTCTataggtagactagtggtaggGTTTATAGACAGCACAGTCTATAGGTAGACCAGTGGgagggtttctatacagcacagTCTACACTTAGACTAGTGGTAGGGTTTATAGACAGCACAGTCTataggtagactagtggtaggGTTTATAGACAGCACAGTCTATAGGTAGACCAGTGGGAGGGTTTCTAAACAGCAC
>TU2446320
AGTTTATAGACAGCACAGTAtataggtagactagtgttagAGTTTATAGACATCACAGTCTataggtagactagtggtaggGTTTATAGACAGAAGAGTCtataggtagactagtgttagAGTTTATAGACATCACAGTCTATATGTAGACTAGTGGTAGGGTTTATAGACAGAACAGTCTATAGGTAGACTAGTGCTAGGGTTTATAGACAGCACAGTCTataggtagactagtggtaggGTTTATAGACAGCACAGTCtataggtagactagtgttagAGTTTATAGACAGCACAGTAtataggtagactagtgttagAGTTTATAGACAGCACAGTCTataggtagactagtggtaggGTTTATAGACAGCACAGTCTataggtagactagtggtaggGTTTATAGACAGCACAGTCtatagGTAGACCAGTGGgagggtttctatacagcacagTCTACACTTAGACTAGTGGTAGGGTTTATAGACAGCACAGTCTataggtagactagtggtaggGTTTATAGACAGCACAGTCTATAGGTAGACCAGTGGGAGGGTTTCTAAACAGCAC
>TU2446321
AGACAGCACAGTCtataggtagactagtgttagAGTTTATAGACATCACAGTCTATATGTAGACTAGTGGTAGGGTTTATAGACAGAACAGTCTATAGGTAGACTAGTGCTAGGGTTTATAGACAGCACAGTCtataggtagactagtgttagAGTTTATAGACATCACAGTCTATATGTAGACTAGTGGTAGGGTTTATAGACAGAACAGTCTGTAGGTAGACTAGTGCTAGGGTTTATAGACAGCACAGTCtataggtagactagtgttagAGTTTATAGACATCACAGTCTATATGTAGACTAGTGGTAGGGTTTATAGACAGAACAGTCTATAGGTAGACTAGTGCTAGGGTTTATAGACAGCACAGTCTataggtagactagtggtaggGTTTATAGACAGCACAGTCTataggtagactagtggtaggGTTTATAGACAGCACAGTCtatagGTAGACCAGTGGgagggtttctatacagcacagTCTACACTTAGACTAGTGGTAGGGTTTATAGACAGCACAGTCTataggtagactagtggtaggGTTTATAGACAGCACAGTCTATAGGTAGACCAGTGGGAGGGTTTCTAAACAGCAC
>TU2446323
ATATTTATCTTAAAAATATGACATGCTCATTACATCCTATGCAGGGAGGCCCACTGTCTCAGACTTTGAAAACACGTGGTACAGAGGTAAAATAGTTGTAAGGTATCTATACAGCACAGTCtataggtagactagtgttagTTTATAGACATCACAGTCTATATGTAGACTAGTGGTGGGGTTTATAGACAGAACAGTCTATAGGTAGACTAGTTTTAGAGTTTATAGACATCACAGTCTATATGTAGACTAGTGGTAGGGTTTATAGACAGAACAGTCTATAGGTAGACTAGTGCTAGGGTTTATAGACAGCACAGTCTataggtagactagtggtaggGTTTATAGACAGCACAGTCtataggtagactagtgttagAGTTTATAGACAGCACAGTCTATAGGTATACTAGTGGTAAGGTTTATAGACAGCACAGTCtataggtagactagtgttagAGTTTATAGACATCACAGTCTATATGTAGACTAGTGGTAGGGTTTATAGACAGAACAGTCTATAGGTAGACTAGTGCTAGGGTTTATAGACAGCACAGTCtataggtagactagtgttagAGTTTATAGACATCACAGTCTATATGTAGACTAGTGGTAGGGTTTATAGACAGAACAGTCTATAAGTAGACTGGTGCTAGGGTTTATAGACAGCACAGTCTataggtagactagtggtaggGTTTATAGACAGCACAGTCtataggtagactagtgttagAGTTTATAGACAGCACAGTAtataggtagactagtgttagAGTTTATAGACAGCACAGTCTataggtagactagtgttagAGTTTATAGACAGCACAGTATATAGGTAGACTAGTTTTAGAGTTTATAGACAGCACAGTCTataggtagactagtggtaggGTTTATAGACAGCACAGTCtataggtagactagtgttagAGTTTATATACAGCACAGTCtataggtagactagtgttagAGTTTATAGACAGCACAGTAtataggtagactagtgttagAGTTTATAGACAGCACAGTCTataggtagactagtggtaggGTTTATAGACAGCACAGTCTataggtagactagtggtaggGTTTATAGACAGCACAGTCTataggtagactagtggtaggGTTTATAGACAGCACAGTCTACACTTAGACTAGTGGTAGGGTTTATAGACAGCACAGTCTataggtagactagtggtaggGTTTATAGACAGCACAGTCTATAGGTAGACCAGTGGgagggtttctatacagcacagTCTACACTTAGACTAGTGGTAGGGTTTATAGACAGCACAGTCTataggtagactagtggtaggGTTTATAGACAGCACAGTCTATAGGTAGACCAGTGGGAGGGTTTCTAAACAGCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2446317 False 1115 lncRNA 0.40 4 43444532 43448124
TU2446320 False 576 lncRNA 0.40 2 43444532 43445627
TU2446321 False 609 lncRNA 0.41 2 43444532 43446140
TU2446323 True 1395 lncRNA 0.39 3 43444532 43448124

Neighbor

gene id symbol gene type direction distance location
emilin2a LOC106595984 coding downstream 46498 43343531 ~ 43398034 (-)
LOC118944838 LOC106596014 coding downstream 367072 43041222 ~ 43077460 (-)
LOC110509179 LOC105010334 coding downstream 457173 42973355 ~ 42987359 (-)
LOC110508296 pde1c coding downstream 485124 42877496 ~ 42959408 (-)
LOC110509177 LOC106597278 coding downstream 671695 42733643 ~ 42772837 (-)
G2138781 NA non-coding downstream 37058 43407242 ~ 43407474 (-)
G2138776 NA non-coding downstream 45565 43398756 ~ 43398967 (-)
G2138741 NA non-coding downstream 112259 43313416 ~ 43332273 (-)
G2138694 NA non-coding downstream 139643 43304471 ~ 43304889 (-)
G2138691 NA non-coding downstream 160534 43280414 ~ 43283998 (-)
G2138871 NA non-coding upstream 18656 43466780 ~ 43469437 (-)
G2138883 NA non-coding upstream 39851 43487975 ~ 43488244 (-)
G2138886 NA non-coding upstream 46744 43494868 ~ 43495115 (-)
G2138887 NA non-coding upstream 47591 43495715 ~ 43503577 (-)
G2138888 NA non-coding upstream 56002 43504126 ~ 43505921 (-)
G2138294 LOC106594920 other downstream 1093080 42349216 ~ 42351452 (-)
G2137814 LOC106597294 other downstream 1217567 42220922 ~ 42226965 (-)
G2137648 LOC106596196 other downstream 1630331 41810795 ~ 41814201 (-)
G2137555 NA other downstream 1708143 41731714 ~ 41736389 (-)

Expression


Co-expression Network