G2138887


Basic Information

Item Value
gene id G2138887
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 43495715 ~ 43503577 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2446360
CTTGTAGCCGGTGCTATACTGcaccgctgtaactctgcgttgtgtgtggttgatagAGACCATAaacgtggactttggagatcaggtagttttaatcaagcagaactgactctctgcatccaaaaggaaataaaacatttgtagagcacatctgttctgagaatcgtcgcctctttctacaacagatgcacaataggagggactgggatcattcgaggagctagccatcgttcacacatacaatagcctgctaataccttagctagctattaaccacatgttgaattcagaatattgatatcatcctaaaaagtacaattacaagtgcatcttaacaataccatccatttatgagtaacctctaaatatacatcattattcatgaacaaaacattgtgtgtatgactttgtacttaaaagaatcaaacttttctgaagacagaaaaagcgtgcctacctctctcagtgcatcaaaatgatttgagcacgagcacgccgggcaaaacgtaagtacacactccccttctcccaggatgcaggcatgcataacaaatcaacacaacatattgatatatgaacctggtgaaattcacatagTACTTCAACAACTGTTACACA

Function

NR:

description
zonadhesin-like isoform X1

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2446360 True 618 lncRNA 0.40 3 43495715 43503577

Neighbor

gene id symbol gene type direction distance location
emilin2a LOC106595984 coding downstream 97681 43343531 ~ 43398034 (-)
LOC118944838 LOC106596014 coding downstream 418255 43041222 ~ 43077460 (-)
LOC110509179 LOC105010334 coding downstream 508356 42973355 ~ 42987359 (-)
LOC110508296 pde1c coding downstream 536307 42877496 ~ 42959408 (-)
LOC110509177 LOC106597278 coding downstream 722878 42733643 ~ 42772837 (-)
G2138886 NA non-coding downstream 600 43494868 ~ 43495115 (-)
G2138883 NA non-coding downstream 7471 43487975 ~ 43488244 (-)
G2138871 NA non-coding downstream 26278 43466780 ~ 43469437 (-)
G2138859 NA non-coding downstream 47591 43444532 ~ 43448124 (-)
G2138781 NA non-coding downstream 88241 43407242 ~ 43407474 (-)
G2138888 NA non-coding upstream 549 43504126 ~ 43505921 (-)
G2138897 NA non-coding upstream 25686 43529263 ~ 43571301 (-)
G2138909 NA non-coding upstream 35376 43538953 ~ 43541519 (-)
G2138903 NA non-coding upstream 38417 43541994 ~ 43547466 (-)
G2138902 NA non-coding upstream 43181 43546758 ~ 43552663 (-)
G2138294 LOC106594920 other downstream 1144263 42349216 ~ 42351452 (-)
G2137814 LOC106597294 other downstream 1268750 42220922 ~ 42226965 (-)
G2137648 LOC106596196 other downstream 1681514 41810795 ~ 41814201 (-)
G2137555 NA other downstream 1759326 41731714 ~ 41736389 (-)

Expression


Co-expression Network