Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110509503 |
| gene name | LOC106562869 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 835828 ~ 844013 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uridine-cytidine kinase 1-like |
| id | name | namespace |
|---|---|---|
| GO:0044206 | UMP salvage | biological_process |
| GO:0044211 | CTP salvage | biological_process |
| GO:0016310 | phosphorylation | biological_process |
| GO:0005524 | ATP binding | molecular_function |
| GO:0016773 | phosphotransferase activity, alcohol group as acceptor | molecular_function |
| GO:0004849 | uridine kinase activity | molecular_function |
| id | description |
|---|---|
| K00876 | udk, UCK; uridine kinase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021590403.2 | True | 1626 | mRNA | 0.46 | 7 | 835828 | 844013 |
826,000
827,000
828,000
829,000
830,000
831,000
832,000
833,000
834,000
835,000
836,000
836,000
837,000
838,000
839,000
840,000
841,000
842,000
843,000
844,000
845,000
846,000
NC_048593.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509499 | LOC106562841 | coding | upstream | 132002 | 694527 ~ 703826 (+) |
| LOC110509498 | LOC106562841 | coding | upstream | 141480 | 691741 ~ 694348 (+) |
| LOC110509496 | LOC106562840 | coding | upstream | 185702 | 632021 ~ 650126 (+) |
| LOC100305272 | dpm2 | coding | upstream | 206831 | 619789 ~ 629216 (+) |
| LOC110509291 | LOC106562839 | coding | upstream | 221245 | 536258 ~ 614583 (+) |
| LOC110509506 | LOC106562870 | coding | downstream | 427483 | 1271496 ~ 1429741 (+) |
| LOC110509509 | LOC106562874 | coding | downstream | 675403 | 1519416 ~ 1532574 (+) |
| LOC110509512 | LOC106562877 | coding | downstream | 710612 | 1554625 ~ 1558840 (+) |
| LOC110509295 | LOC106562719 | coding | downstream | 728489 | 1572502 ~ 1618684 (+) |
| LOC110509513 | LOC106562718 | coding | downstream | 810579 | 1654592 ~ 1662205 (+) |
| G2139515 | NA | non-coding | upstream | 1661 | 833822 ~ 834167 (+) |
| G2139512 | NA | non-coding | upstream | 8806 | 826787 ~ 827022 (+) |
| G2139439 | NA | non-coding | upstream | 111435 | 724038 ~ 724393 (+) |
| G2139438 | NA | non-coding | upstream | 111954 | 723083 ~ 723874 (+) |
| G2139437 | NA | non-coding | upstream | 114901 | 720611 ~ 720927 (+) |
| G2139464 | NA | non-coding | downstream | 2063 | 846076 ~ 846659 (+) |
| G2139528 | NA | non-coding | downstream | 15516 | 859529 ~ 859842 (+) |
| G2140158 | NA | non-coding | downstream | 123285 | 967298 ~ 968022 (+) |
| G2140165 | NA | non-coding | downstream | 127559 | 971572 ~ 972394 (+) |
| G2140166 | NA | non-coding | downstream | 128503 | 972516 ~ 972774 (+) |
| G2139202 | NA | other | upstream | 510780 | 324366 ~ 325048 (+) |
| G2139145 | NA | other | upstream | 676995 | 158015 ~ 158833 (+) |
| LOC110509486 | LOC106562830 | other | upstream | 686575 | 131779 ~ 149258 (+) |
| G2139520 | LOC106562868 | other | downstream | 8236 | 852249 ~ 853787 (+) |
| LOC110509554 | LOC105007341 | other | downstream | 1094371 | 1935597 ~ 1941376 (+) |
| G2142277 | NA | other | downstream | 2239204 | 3083217 ~ 3083571 (+) |
