Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110509525 |
| gene name | LOC106562824 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 3317596 ~ 3324117 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| actin-related protein 2/3 complex subunit 5-like protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021590445.2 | False | 2702 | mRNA | 0.41 | 4 | 3317596 | 3324117 |
| TU2450893 | True | 1157 | TUCP | 0.43 | 3 | 3318943 | 3324096 |
3,313,000
3,314,000
3,315,000
3,316,000
3,317,000
3,318,000
3,319,000
3,320,000
3,321,000
3,322,000
3,323,000
3,324,000
3,325,000
3,326,000
3,327,000
3,328,000
3,329,000
3,330,000
NC_048593.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509519 | LOC106562828 | coding | downstream | 237376 | 3065595 ~ 3080220 (-) |
| LOC110509517 | LOC106562762 | coding | downstream | 495034 | 2643985 ~ 2822562 (-) |
| LOC118945570 | NA | coding | downstream | 805725 | 2511685 ~ 2511871 (-) |
| LOC110509296 | LOC108246815 | coding | downstream | 819937 | 2491544 ~ 2497659 (-) |
| LOC118945670 | NA | coding | downstream | 848151 | 2469329 ~ 2469445 (-) |
| LOC110509526 | LOC106562882 | coding | upstream | 125682 | 3449799 ~ 3475427 (-) |
| LOC110509529 | NA | coding | upstream | 720164 | 4044281 ~ 4062480 (-) |
| LOC110509299 | ptpa | coding | upstream | 824343 | 4148460 ~ 4158891 (-) |
| LOC110509531 | LOC106570883 | coding | upstream | 884749 | 4208866 ~ 4430679 (-) |
| LOC118945302 | NA | coding | upstream | 901306 | 4225423 ~ 4229194 (-) |
| G2142911 | ppp6c | non-coding | downstream | 58748 | 3254764 ~ 3258848 (-) |
| G2142866 | NA | non-coding | downstream | 146963 | 3169657 ~ 3170633 (-) |
| G2142802 | NA | non-coding | downstream | 253731 | 3061313 ~ 3063865 (-) |
| G2142801 | NA | non-coding | downstream | 257784 | 3059585 ~ 3059812 (-) |
| G2142800 | NA | non-coding | downstream | 258326 | 3059003 ~ 3059270 (-) |
| G2142971 | NA | non-coding | upstream | 48636 | 3372753 ~ 3373016 (-) |
| G2142990 | NA | non-coding | upstream | 76675 | 3400792 ~ 3401429 (-) |
| G2143085 | NA | non-coding | upstream | 231119 | 3555236 ~ 3555464 (-) |
| G2143089 | NA | non-coding | upstream | 241573 | 3565690 ~ 3565936 (-) |
| G2141289 | LOC100380853 | other | downstream | 1667865 | 1649299 ~ 1649731 (-) |
| G2141258 | NA | other | downstream | 1704387 | 1598021 ~ 1613209 (-) |
| LOC110509502 | LOC106562868 | other | downstream | 2379687 | 843748 ~ 937986 (-) |
| LOC110509492 | LOC106562836 | other | downstream | 2889524 | 425727 ~ 437447 (-) |
| LOC110509490 | LOC106562833 | other | downstream | 2916041 | 398511 ~ 425356 (-) |
| G2143134 | NA | other | upstream | 304048 | 3628165 ~ 3635240 (-) |
| G2144911 | NA | other | upstream | 1890966 | 5215083 ~ 5226311 (-) |
| G2145316 | opi-1 | other | upstream | 2317359 | 5641476 ~ 5672690 (-) |
| G2145335 | NA | other | upstream | 2425569 | 5749686 ~ 5755666 (-) |
