LOC110509535 (purg)


Basic Information

Item Value
gene id LOC110509535
gene name purg
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 4866710 ~ 4871169 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036968247.1
AACTGTCAGACGCAGGAAAGGGGGTAGCTAGGTAACCCGTCTTGCCAAGGGTTACGATGAAAATGGCATCAAACCGTACTAACGCTTGACCTTTAAATCCGGACGCAGAAACTCGATCAACTGAATACTCCTGTCAGGTAGCGGCCATTTCAGGTCATTTCAGGTATCTTTCAAATGTAGCCTACTATAGCAATAAACGGCCTGTCTAGCGAAACGAATAAGGTTACATGAAAGACAGCATGTTGGCTGGTAGTGGCAGGCAATTTGTCGTGTGCTCAACTGTGTTGGAAACGAAATAATGATGTCTGATACAACATATTcaagagggatggaaagagacagaggaaggattACATCAGATTCTATGGCGAGAGGCGCATATCCTCAACAGTATGTTCACCCTGGCAGTCAGCAGCAGGGCATAGACATCCAGGAGCTTGCCTCTAAACGTGTCGACATCCAGAAGAAACGGTTTTATTTGGATGTAAAACAAAGTGCACGGGGCCGATTCCTAAAAATTGCAGAGGTTTGGATTGGAAGAGAACGTCATGATAACATCAGAAAAAGCAAATTAACGCTGTCCATGTCAATGGCACCCGATCTACGTTATTGCCTGGGGAACTTCATTGATTATTACGCTCATATTGGGTTGAGAGGTGGCCTGGTACCACGGCCAGAAGAGCAGAGCAATGGCCAGGGCCGCCCGCACGATTCCCGCAGAAGACCGCAAGATCACCACGCAGCATCAGTGTCTCCCACTGGCTCTGCGGTGTCGGAGGAACATACTCATCGCGTCCTGAAGAGTGAATTCATTGAGAGAGACAATAGAAAGTACTATCTGGACCTGAAAGAGAACCAGCGAGGCAGGTTCCTCCGCATCAGACAGACTGTCAGCAGAGGGCATGGGGCCATCGGTTACTACGGCCAGGGCATCGATCAAACCATAGTGTTGCCGGCTCAAGGGCTAATCGAATTCAGAGATGCACTGTCGCAGCTGATTGAAGACTACGGCGATGATGATGCCACGGATGAGCTTGGAAGAGGCAATGGGAACCATGAAGAATCCACCGAGTTTCCCGAGGCAGCATCATTCCGAGTGGACAATAAGAGGTTTTATTTCGACGTTGGTTCCAATCGGTATGGTGTCTTTTTAAAGATTAGCGAGGTAAAACAGCCATACAGGAACACCATAACGGTTCCCATGAAAGCCTGGGCCAAATTTGGAGATCATTTCATTAGGTATGAGGAAGAAATGCAGCGAATGTGCACCTGTCACaaggagaaggggacagagacTCGCGAGGACATTGGAGAACAAGAGGATTGACAACGGCATTATATGGCTGTAAGAGGTTTCTAGTGATGGTGGGTTAAAACAGGGATGGAAAAAGCTAAACATGACAATATCCTAGAACATAtgaaaaagtattatttaatgtACTTCTATTAGGCCTATGTCTCTGGTCAACTAGCACTTTTGCTTTGTTCATGGTCATTCCGGCTTAAATCATACATTTCGATTATGGCATCCGTTTTGAAATTGGTGCAGCAGGACGTGTTGCCTattgaaaaatgaaaaaaatgatatTCAAAAGGCAAAATGATGATATAGGTAATTTATGTGAATCAAATCTCTTTTTTTCATTGTGGTTGACTGAGTGTGCGAATGAAAGTACGTGTGGGCATGTGATTGTCTGATTGAGAAAAAAAGGTGAGACATGAAAGTGTACACGTCCTGTCCCCCACAAACATTGGTAGGGGGTTAATGTTAGATATACTGCTGAATGCTAGACATGATATTGTTGTTTAAACAGTAACAATAATTTGTGTAGGTAGCGCTTCATGATTTCGTTTTATAGAATAAGGGACAGTTTGGTTGAGGGTTCGCCGACCATCACGGACGAGCTCAAACTCCCTGCATATGTCATTACTCTATAATCAGAGCCGGCTGCAGACAATTATCAACTAGGGGAAATcctattttcaacattttgatgctatatttataattatataaaatatatgcaacGATTTTTCATTAACAGGTTTATGTACCAAAGCACTACACACAACCAATAAGCAATTCAGAACTACATACCGAATACCGACTTCGAGCACATCATCATGGTTTGCGTTTTCAACACCCCATTCAAATAGAGTATGTCAATCCGGACAAACAGGGAATACATCTTTCCCTACTCAGTATCGATggcttggcttgacaatctctgaatgtcatttcacttttttatattttgtaacagatgtctttTTCCATTCATCGAATGGCTGGTGTGCAGTTTGGATGATGGAATTATATCAGAGTGGAGTGGATGAATGTGCGCAGGTAACCTACTGTTGAAGTAGCCTAATCAGATTAAAACATTGTGACTGATTGAGTTTATGCCATacataaaatacatgtttaaagtTAAATTAcaaatatttaggctatattgaaGCGTTAGGTTCAAGGTCGAGAAATAGCTGCTCGGATGGAAAAGGAGATACAACGCACATGAAggtttcctgaataactgggcctgctaGAAGCATAGGCCTATGTGGCTGCACTATTTTAAACGACTCAGGAGAATGATGATCAGCAACAGAAATTTAAATACAGCCTGACTGTCCTGCACGATGCCTTTCTAGACTTTATAATCTGCTGAGAGTAGACCCACAATTTATCCAAATGGAATGAAACGTTGAATTAACTGCTTTTATTCAAATTACATTATTACTTGTACTTACTTGAAAATCATAATTCAAATATGAATTGCATTgcggtgttgtaggctagtctaggtaggatcattttATTGTCCCTAAGGCCATACATGTAATTAACTGTATAACAGAGCCAGCAATAAAAAATTACATAATTGAAAGATAAAATAAAAGGTGTACCCCGTGTAATAATACTAAACAACATTTGTAGGCtacaacacctagcgacctcacCACGATATTTGAGCCTTTTGGGATTGTAGTGAATAGTGGGGCAGGGAATAAAACTCAGATACCTGGCGTGACAGACAAACACCATATGCATCGTGTCAATAGGGTTAACCCACTTGCTTGGAATTGTAACATGGCACATATGGCAAGGTTTGTTACACTGTCCCCTCCTTACTCGAAGGCACATCCCTGTGCTTTGACTACTCAGCCCCCCAGCATGTCTGAGCCATTGCATAGCCGCCATCCCACTTTTGACACCAGTGTAGCAAACGGCAGGACAAATATGTAAAACCGgtgctgtgttcgaatacccatactaacatactgtatacgaCATACTTAATGAttatatactattagttcattttagtatactgtaagggACCAGGGCTTGAGTCCCAGTCAGGGTACCCCCTAATCCACTATATTGGTATCAGCCAGGTGTTGCAGCCTTTCAGTTGAATGTACTAGGGCTTTGCCAGTCTactggaagttgatgctgttgctatgcaacctcttgctcgcttgttagcataacatatgactagctagacattttacgatttcgggtgtgttcgtaaattcaatatGGAGTGCCAGAGAGCGATCAGAGTTagctctgggcgttcgtaaattcagagctttGTCATGTTCATTTGTAAATTCAGTGTTTTCAATCTCGGAGGCCACACTGGAAGctctgaggagtagggttgatctgagcgttctgCCCTCACAACGGTAGTCAatcacccaagctaactggctaacgttggctagcttactagctacttccagacacaaatgagagaacacctcactctgaccattttactcaccctagcagagctgcttaggctgttttcatgttatccagagcgttggtgactgtaactgtgctgctggcaacagtTTAATTTAGCTTTTTTTTTGCAACGTTTACCGACACCgttcatattcaacgggtgtatCCGCTCTCGTTGGAATTTGGCTGTATATTTTCCACCATTTAAAAAACTGGAAGAACGATCCATctaccactattgtcactatgGGGAGAGGGCAGGATAGAGTTAACTGTATAGTAAGCGCTAAGAAAAGCGTAGTGCGTAAGAGAAGTACCTAAACACCTTGATAGGCGAGGCGCATGCAAGAAGATGAGGAAATGTGGCTATATGGAATAAATTATATAGTAAAACGTGCAAAAtggggaatgtaaaccaggtttaaaaaaaatgactACCCTCCCCCGCGCCCCACCAAAAATCAGCAGGGATACTGCAATTACTTAGTTATAACGTAAGTCTTGcatctcatacatacacacaaacaaccTTGACGGAAATATAGACTATTATTCACACGATCTACCTTTATCGCACCACTGAGCACAGTAGATATTCATTCCAGGTTTTAGGAGGCATCCCAAAtagcctacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggct

Function

symbol description
purg Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific; RNA polymerase II transcription regulatory region sequence-specific DNA binding activity; and purine-rich negative regulatory element binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human PURG (purine rich element binding protein G).

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K21800 PURG; purine-rich element-binding protein gamma

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036968247.1 True 4460 mRNA 0.43 1 4866710 4871169

Neighbor

gene id symbol gene type direction distance location
LOC110509534 LOC105021738 coding downstream 14576 4822193 ~ 4852134 (-)
LOC110509533 LOC106562887 coding downstream 176369 4685524 ~ 4690341 (-)
LOC110509302 psmb7 coding downstream 243274 4620399 ~ 4636327 (-)
LOC110509531 LOC106570883 coding downstream 436031 4208866 ~ 4430679 (-)
LOC118945302 NA coding downstream 637516 4225423 ~ 4229194 (-)
LOC110509538 LOC106562893 coding upstream 197430 5068599 ~ 5124878 (-)
LOC110509542 fbxw2 coding upstream 643722 5514891 ~ 5523585 (-)
LOC118945317 NA coding upstream 770283 5641452 ~ 5641777 (-)
LOC118945316 NA coding upstream 770682 5641851 ~ 5643016 (-)
opi-1 opi-1 coding upstream 785417 5656586 ~ 5658119 (-)
G2144448 NA non-coding downstream 13695 4852691 ~ 4853015 (-)
G2144440 NA non-coding downstream 22814 4843371 ~ 4843896 (-)
G2144300 NA non-coding downstream 46034 4820461 ~ 4820676 (-)
G2144295 NA non-coding downstream 71435 4794692 ~ 4795275 (-)
G2144225 NA non-coding downstream 133838 4732590 ~ 4732872 (-)
G2144510 LOC106562892 non-coding upstream 82272 4953441 ~ 4954009 (-)
G2144544 NA non-coding upstream 134822 5005991 ~ 5006226 (-)
G2144548 NA non-coding upstream 139568 5010737 ~ 5010988 (-)
G2144550 NA non-coding upstream 140876 5012045 ~ 5012492 (-)
G2144552 NA non-coding upstream 143476 5014645 ~ 5015479 (-)
G2143134 NA other downstream 1231470 3628165 ~ 3635240 (-)
LOC110509525 LOC106562824 other downstream 1542614 3317596 ~ 3324117 (-)
G2141289 LOC100380853 other downstream 3216979 1649299 ~ 1649731 (-)
G2141258 NA other downstream 3253501 1598021 ~ 1613209 (-)
G2144911 NA other upstream 343914 5215083 ~ 5226311 (-)
G2145316 opi-1 other upstream 770307 5641476 ~ 5672690 (-)
G2145335 NA other upstream 878517 5749686 ~ 5755666 (-)
G2145511 NA other upstream 935896 5807065 ~ 5807624 (-)
G2145604 NA other upstream 1229602 6100771 ~ 6108752 (-)

Expression


Co-expression Network