Item | Value |
---|---|
gene id | LOC110509542 |
gene name | fbxw2 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048593.1 |
NCBI id | CM023247.2 |
chromosome length | 47748341 |
location | 5514891 ~ 5523585 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
symbol | description |
---|---|
fbxw2 | Orthologous to human FBXW2 (F-box and WD repeat domain containing 2). |
description |
---|
PREDICTED: F-box/WD repeat-containing protein 2 isoform X2 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021590466.2 | False | 5115 | mRNA | 0.45 | 8 | 5514891 | 5523585 |
XM_021590467.2 | False | 4810 | mRNA | 0.46 | 8 | 5514891 | 5523585 |
TU2453203 | True | 3446 | lncRNA | 0.42 | 2 | 5514952 | 5518419 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110509538 | LOC106562893 | coding | downstream | 390013 | 5068599 ~ 5124878 (-) |
LOC110509535 | purg | coding | downstream | 643722 | 4866710 ~ 4871169 (-) |
LOC110509534 | LOC105021738 | coding | downstream | 662757 | 4822193 ~ 4852134 (-) |
LOC110509533 | LOC106562887 | coding | downstream | 824550 | 4685524 ~ 4690341 (-) |
LOC110509302 | psmb7 | coding | downstream | 891455 | 4620399 ~ 4636327 (-) |
LOC118945317 | NA | coding | upstream | 117867 | 5641452 ~ 5641777 (-) |
LOC118945316 | NA | coding | upstream | 118266 | 5641851 ~ 5643016 (-) |
opi-1 | opi-1 | coding | upstream | 133001 | 5656586 ~ 5658119 (-) |
LOC110509355 | LOC106581842 | coding | upstream | 139644 | 5663229 ~ 5663766 (-) |
LOC118936257 | opi-1 | coding | upstream | 147103 | 5670688 ~ 5672530 (-) |
G2145079 | NA | non-coding | downstream | 20964 | 5493712 ~ 5493927 (-) |
G2145069 | NA | non-coding | downstream | 27927 | 5486734 ~ 5486964 (-) |
G2145068 | NA | non-coding | downstream | 28343 | 5486255 ~ 5486548 (-) |
G2145066 | NA | non-coding | downstream | 31880 | 5480579 ~ 5483011 (-) |
G2144981 | NA | non-coding | downstream | 158762 | 5346591 ~ 5356129 (-) |
G2145119 | NA | non-coding | upstream | 2428 | 5526013 ~ 5526268 (-) |
G2145124 | NA | non-coding | upstream | 4836 | 5528421 ~ 5528662 (-) |
G2145129 | NA | non-coding | upstream | 8802 | 5532387 ~ 5532594 (-) |
G2145143 | NA | non-coding | upstream | 21683 | 5545268 ~ 5545516 (-) |
G2145144 | NA | non-coding | upstream | 22527 | 5546112 ~ 5546636 (-) |
G2144911 | NA | other | downstream | 288580 | 5215083 ~ 5226311 (-) |
LOC110509531 | LOC106570883 | other | downstream | 1084355 | 4208866 ~ 4430679 (-) |
G2143134 | NA | other | downstream | 1879651 | 3628165 ~ 3635240 (-) |
LOC110509525 | LOC106562824 | other | downstream | 2190795 | 3317596 ~ 3324117 (-) |
G2141289 | LOC100380853 | other | downstream | 3865160 | 1649299 ~ 1649731 (-) |
G2145316 | opi-1 | other | upstream | 117891 | 5641476 ~ 5672690 (-) |
G2145335 | NA | other | upstream | 226101 | 5749686 ~ 5755666 (-) |
G2145511 | NA | other | upstream | 283480 | 5807065 ~ 5807624 (-) |
G2145604 | NA | other | upstream | 577186 | 6100771 ~ 6108752 (-) |
G2145618 | LOC106591448 | other | upstream | 617481 | 6141066 ~ 6148494 (-) |