trnat-ugu-44



Basic Information


Item Value
gene id trnat-ugu-44
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 5740616 ~ 5740687 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnat-ugu-44
ggcatggtggccaagcggtaaggcgtcggtcttgtaaaccgaagatcatgggttcaaatcccatctttgcct

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnat-ugu-44 True 72 mRNA 0.53 1 5740616 5740687

Neighbor


gene id symbol gene type direction distance location
trnaa-ugc-217 NA coding downstream 15561 5724984 ~ 5725055 (-)
trnat-cgu-86 NA coding downstream 16074 5724471 ~ 5724542 (-)
trnat-cgu-85 NA coding downstream 18313 5722232 ~ 5722303 (-)
trnat-cgu-84 NA coding downstream 20575 5719970 ~ 5720041 (-)
trnat-cgu-83 NA coding downstream 22837 5717708 ~ 5717779 (-)
trnaa-cgc-6 NA coding upstream 1186 5741873 ~ 5741944 (-)
trnat-cgu-87 NA coding upstream 2932 5743619 ~ 5743690 (-)
trnat-cgu-88 NA coding upstream 5194 5745881 ~ 5745952 (-)
trnaa-ugc-218 NA coding upstream 5707 5746394 ~ 5746465 (-)
trnat-cgu-89 NA coding upstream 7446 5748133 ~ 5748204 (-)
G2145326 NA non-coding downstream 37185 5694920 ~ 5703431 (-)
G2145314 NA non-coding downstream 70736 5638808 ~ 5669880 (-)
G2145313 NA non-coding downstream 72389 5637429 ~ 5668227 (-)
G2145302 NA non-coding downstream 123935 5616457 ~ 5616681 (-)
G2145236 NA non-coding downstream 138320 5602056 ~ 5602296 (-)
G2145342 NA non-coding upstream 3610 5744297 ~ 5751728 (-)
G2145344 NA non-coding upstream 10613 5751300 ~ 5753868 (-)
G2145345 NA non-coding upstream 30243 5770930 ~ 5777155 (-)
G2145347 NA non-coding upstream 30702 5771389 ~ 5777703 (-)
G2145356 NA non-coding upstream 53762 5794449 ~ 5797345 (-)
G2145316 opi-1 other downstream 67926 5641476 ~ 5672690 (-)
G2144911 NA other downstream 514305 5215083 ~ 5226311 (-)
LOC110509531 LOC106570883 other downstream 1310080 4208866 ~ 4430679 (-)
G2143134 NA other downstream 2105376 3628165 ~ 3635240 (-)
LOC110509525 LOC106562824 other downstream 2416520 3317596 ~ 3324117 (-)
G2145335 NA other upstream 8999 5749686 ~ 5755666 (-)
G2145511 NA other upstream 66378 5807065 ~ 5807624 (-)
G2145604 NA other upstream 360084 6100771 ~ 6108752 (-)
G2145618 LOC106591448 other upstream 400379 6141066 ~ 6148494 (-)
G2145542 NA other upstream 408889 6137289 ~ 6252866 (-)

Expression



Co-expression Network