Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110511721 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 5827044 ~ 5827912 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| protein transport protein Sec16A-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021592520.2 | True | 660 | mRNA | 0.48 | 3 | 5827044 | 5827912 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnaa-cgc-8 | NA | coding | downstream | 33279 | 5793694 ~ 5793765 (-) |
| trnaa-cgc-7 | NA | coding | downstream | 44016 | 5782957 ~ 5783028 (-) |
| trnat-ugu-46 | NA | coding | downstream | 57330 | 5769643 ~ 5769714 (-) |
| trnaa-ugc-222 | NA | coding | downstream | 71536 | 5755437 ~ 5755508 (-) |
| trnat-cgu-91 | NA | coding | downstream | 72053 | 5754920 ~ 5754991 (-) |
| LOC118945579 | NA | coding | upstream | 68494 | 5896406 ~ 5929252 (-) |
| LOC118945553 | NA | coding | upstream | 68991 | 5896903 ~ 5897084 (-) |
| LOC110509559 | NA | coding | upstream | 753288 | 6579264 ~ 6594474 (-) |
| LOC118945709 | NA | coding | upstream | 765905 | 6593817 ~ 6593895 (-) |
| LOC118945279 | NA | coding | upstream | 777405 | 6605317 ~ 6607608 (-) |
| G2145516 | NA | non-coding | downstream | 535 | 5826256 ~ 5826509 (-) |
| G2145515 | NA | non-coding | downstream | 2797 | 5824015 ~ 5824247 (-) |
| G2145514 | NA | non-coding | downstream | 7635 | 5819050 ~ 5819409 (-) |
| G2145512 | NA | non-coding | downstream | 17932 | 5808878 ~ 5809112 (-) |
| G2145510 | NA | non-coding | downstream | 20397 | 5806254 ~ 5806647 (-) |
| G2145525 | NA | non-coding | upstream | 9888 | 5837800 ~ 5838133 (-) |
| G2145532 | NA | non-coding | upstream | 21222 | 5849134 ~ 5849610 (-) |
| G2145544 | NA | non-coding | upstream | 47044 | 5874956 ~ 6193099 (-) |
| G2145550 | NA | non-coding | upstream | 49883 | 5877795 ~ 5972101 (-) |
| G2145511 | NA | other | downstream | 19420 | 5807065 ~ 5807624 (-) |
| G2145335 | NA | other | downstream | 71378 | 5749686 ~ 5755666 (-) |
| G2145316 | opi-1 | other | downstream | 154354 | 5641476 ~ 5672690 (-) |
| G2144911 | NA | other | downstream | 600733 | 5215083 ~ 5226311 (-) |
| LOC110509531 | LOC106570883 | other | downstream | 1396508 | 4208866 ~ 4430679 (-) |
| G2145604 | NA | other | upstream | 272859 | 6100771 ~ 6108752 (-) |
| G2145618 | LOC106591448 | other | upstream | 313154 | 6141066 ~ 6148494 (-) |
| G2145542 | NA | other | upstream | 321664 | 6137289 ~ 6252866 (-) |
| G2146036 | NA | other | upstream | 821266 | 6649178 ~ 6649663 (-) |
