LOC118945662


Basic Information

Item Value
gene id LOC118945662
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 6291536 ~ 6291652 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005040777.1
tgactctggtttctcttcattacgcacaagcctttcgccttttactaaagacttccgtggagaggaacacttacgagttcaacgtatttttggagcggctttgcttcttgcagagcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005040777.1 True 117 mRNA 0.46 1 6291536 6291652

Neighbor

gene id symbol gene type direction distance location
LOC118945568 NA coding upstream 365 6290990 ~ 6291171 (+)
LOC118945539 NA coding upstream 6425 6284917 ~ 6285111 (+)
LOC118945661 NA coding upstream 12386 6279034 ~ 6279150 (+)
LOC118945555 NA coding upstream 12952 6278407 ~ 6278584 (+)
LOC118945545 NA coding upstream 17198 6274163 ~ 6274338 (+)
LOC118945546 NA coding downstream 5362 6278174 ~ 6297190 (+)
LOC118945664 NA coding downstream 5667 6297319 ~ 6297435 (+)
LOC118945564 NA coding downstream 10822 6302474 ~ 6302646 (+)
LOC118945577 NA coding downstream 12833 6304485 ~ 6304601 (+)
LOC118945566 NA coding downstream 18235 6309887 ~ 6310066 (+)
G2145358 NA non-coding upstream 12520 6245875 ~ 6279016 (+)
G2145479 NA non-coding upstream 74960 6209974 ~ 6216576 (+)
LOC118945526 NA non-coding upstream 104029 6143189 ~ 6187507 (+)
LOC118945535 NA non-coding upstream 129472 6155847 ~ 6162064 (+)
LOC118945521 NA non-coding upstream 135128 6142925 ~ 6156408 (+)
G2145650 NA non-coding downstream 12404 6304056 ~ 6304258 (+)
G2145685 NA non-coding downstream 46219 6337871 ~ 6339506 (+)
G2145696 NA non-coding downstream 54451 6346103 ~ 6346822 (+)
G2145699 NA non-coding downstream 56176 6347828 ~ 6349075 (+)
G2145705 NA non-coding downstream 72658 6364310 ~ 6364513 (+)
LOC118945315 LOC106593246 other upstream 18043 6267751 ~ 6274178 (+)
G2145368 NA other upstream 59038 6188572 ~ 6232498 (+)
G2145469 NA other upstream 71594 6182511 ~ 6219942 (+)
G2145472 LOC106591448 other upstream 96779 6187647 ~ 6194757 (+)
G2145424 NA other upstream 369230 5914627 ~ 5922306 (+)
G2145733 NA other downstream 227038 6518690 ~ 6519140 (+)
LOC110509307 LOC106562924 other downstream 360381 6640782 ~ 6664348 (+)
G2146821 NA other downstream 1708477 8000129 ~ 8000490 (+)
LOC118945282 NA other downstream 2666151 8957803 ~ 9032295 (+)
G2149183 NA other downstream 3082348 9374000 ~ 9374512 (+)

Expression


Co-expression Network