Item | Value |
---|---|
gene id | LOC110509591 |
gene name | LOC106562961 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048593.1 |
NCBI id | CM023247.2 |
chromosome length | 47748341 |
location | 8618042 ~ 8682244 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
noelin-like isoform X3 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036967474.1 | False | 7168 | mRNA | 0.44 | 6 | 8618042 | 8651204 |
XM_021590573.2 | False | 4218 | mRNA | 0.47 | 6 | 8618042 | 8651918 |
XM_021590574.2 | False | 4097 | mRNA | 0.46 | 6 | 8618042 | 8678093 |
XM_021590575.2 | True | 3733 | mRNA | 0.46 | 6 | 8618042 | 8682244 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110509590 | LOC106562960 | coding | downstream | 385399 | 8224378 ~ 8232643 (-) |
LOC110509589 | LOC106568849 | coding | downstream | 401197 | 8209282 ~ 8216845 (-) |
LOC110509588 | NA | coding | downstream | 409391 | 8202543 ~ 8208651 (-) |
LOC110509310 | LOC106562962 | coding | upstream | 78859 | 8761103 ~ 8889487 (-) |
LOC118945710 | NA | coding | upstream | 341551 | 9023795 ~ 9023922 (-) |
LOC110509593 | LOC106562963 | coding | upstream | 345902 | 9028146 ~ 9130315 (-) |
LOC110509595 | LOC106562965 | coding | upstream | 459745 | 9141989 ~ 9150865 (-) |
ptcd2 | ptcd2 | coding | upstream | 483996 | 9166240 ~ 9170359 (-) |
G2148371 | NA | non-coding | downstream | 5792 | 8612007 ~ 8612250 (-) |
G2148352 | NA | non-coding | downstream | 33121 | 8584557 ~ 8584921 (-) |
G2148253 | NA | non-coding | downstream | 88411 | 8443032 ~ 8529631 (-) |
G2148247 | NA | non-coding | downstream | 153324 | 8433546 ~ 8464718 (-) |
G2148626 | NA | non-coding | upstream | 183906 | 8866150 ~ 8867572 (-) |
G2148651 | NA | non-coding | upstream | 213804 | 8896048 ~ 8896515 (-) |
G2149023 | NA | non-coding | upstream | 475129 | 9157373 ~ 9157686 (-) |
LOC110509597 | LOC106562968 | non-coding | upstream | 494913 | 9177157 ~ 9241546 (-) |
G2149040 | NA | non-coding | upstream | 513512 | 9195756 ~ 9195974 (-) |
LOC110509586 | LOC106562956 | other | downstream | 450011 | 8130783 ~ 8168089 (-) |
G2146036 | NA | other | downstream | 1968379 | 6649178 ~ 6649663 (-) |
LOC110509559 | NA | other | downstream | 2023568 | 6579264 ~ 6594474 (-) |
G2145542 | NA | other | downstream | 2365176 | 6137289 ~ 6252866 (-) |
G2145618 | LOC106591448 | other | downstream | 2469548 | 6141066 ~ 6148494 (-) |
ttc33 | LOC106568686 | other | upstream | 682968 | 9365212 ~ 9437537 (-) |
G2151189 | NA | other | upstream | 2035777 | 10718021 ~ 10799318 (-) |
ttll11 | LOC106562979 | other | upstream | 2269005 | 10923070 ~ 10969315 (-) |
G2151771 | NA | other | upstream | 2310922 | 10993166 ~ 10993879 (-) |
LOC100135966 | rps27a | other | upstream | 2559750 | 11241994 ~ 11244060 (-) |