LOC118945275 (LOC107691784)


Basic Information

Item Value
gene id LOC118945275
gene name LOC107691784
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 9209358 ~ 9209829 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005040380.1
AATGAGATCCGCGCAACACTGGTTGACCACGTTGTCAACCACGGCCTGAcgctgagggaggctggactgCGAGTACAGCCAAATCTAAGCCGATATACAGTGGCAAGTGTGATGAGAACATTTCGActggaaaatagGATTGAGGGTCAGGGACGACAAGGGGGAAGGCCTCCTATGTTCACAgaacagcaagagagggagatagtaaacatggttttggccaacaatgctaTAACACTCAAGCAGCTCCAAGCTAACATTGTCAATAACCATGCCATTTTCCACGATATCCATCaggtctcaacatcaacactggcacgcatcc

Function

NR:

description
PREDICTED: uncharacterized protein LOC107738097

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005040380.1 True 325 mRNA 0.49 2 9209358 9209829

Neighbor

gene id symbol gene type direction distance location
LOC110509594 rexo4 coding upstream 67987 9137291 ~ 9141371 (+)
LOC118945282 NA coding upstream 179521 8957803 ~ 9032295 (+)
LOC110509587 fa69b coding upstream 1007998 8173842 ~ 8201360 (+)
LOC110509309 LOC106562955 coding upstream 1074045 8102932 ~ 8135313 (+)
LOC118945305 NA coding upstream 1175436 8028448 ~ 8033922 (+)
LOC110509598 pe2r4 coding downstream 151129 9309984 ~ 9366518 (+)
LOC110509604 LOC106562973 coding downstream 854338 10064167 ~ 10309768 (+)
zgc:63972 LOC106562974 coding downstream 1263603 10473432 ~ 10496533 (+)
si:dkeyp-72a4.1 LOC106562976 coding downstream 1396326 10606155 ~ 10618148 (+)
LOC110509315 LOC106562976 coding downstream 1491225 10701054 ~ 10906165 (+)
G2148870 NA non-coding upstream 7791 9201113 ~ 9201567 (+)
G2148857 LOC106562968 non-coding upstream 28417 9180704 ~ 9180941 (+)
G2148827 NA non-coding upstream 28869 9177170 ~ 9180489 (+)
G2148856 NA non-coding upstream 33135 9176010 ~ 9176223 (+)
G2148853 NA non-coding upstream 37324 9171682 ~ 9172034 (+)
G2149242 NA non-coding downstream 243825 9453654 ~ 9457539 (+)
G2149334 LOC106562972 non-coding downstream 407584 9617413 ~ 9617782 (+)
G2149335 NA non-coding downstream 408808 9618637 ~ 9619279 (+)
G2149459 NA non-coding downstream 572436 9782265 ~ 9782604 (+)
G2146821 NA other upstream 1208868 8000129 ~ 8000490 (+)
LOC110509307 LOC106562924 other upstream 2550834 6640782 ~ 6664348 (+)
G2145733 NA other upstream 2690218 6518690 ~ 6519140 (+)
LOC118945315 LOC106593246 other upstream 2935865 6267751 ~ 6274178 (+)
G2149183 NA other downstream 164171 9374000 ~ 9374512 (+)
G2150729 NA other downstream 1251924 10461753 ~ 10462220 (+)
G2151555 NA other downstream 2150556 11359557 ~ 11432252 (+)
G2152150 NA other downstream 2554395 11764224 ~ 11766351 (+)

Expression


Co-expression Network