si:dkeyp-72a4.1 (LOC106562976)


Basic Information

Item Value
gene id si:dkeyp-72a4.1
gene name LOC106562976
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 10606155 ~ 10618148 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036967237.1
CTTTAACTTTCTCTCtctgattttctctctctctcgctcgctctccctcctctctctcgctctcccccctctcgcccTTCTCTCTCTAGACATGTGGGGTCCCCCAGCTCACTGGATGTCAAGTGGTCACCCTTATGATGAGAGGACTGTGTGGAACCCCAAGTTCTGTGTGGTCACCGACAGTCAGATGCTGCTCCTGGACAAAGAGGAGATCCATCCTTTGTTGTTGCAGGAGAGGAGGTCAGAGTCGTGTCAGGTTCGGCTTCTACGACGCACCATCAGCGTCCCTGTGGAAACCAACTTCCACAGCCCAGAGTTCCACAGCCAGCTGTCCACTGAGAGCGCAATTATGGGCACTGTCGTGTAG

Function

NR:

description
ras/Rap GTPase-activating protein SynGAP-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036967237.1 True 367 mRNA 0.55 3 10606155 10618148

Neighbor

gene id symbol gene type direction distance location
zgc:63972 LOC106562974 coding upstream 109622 10473432 ~ 10496533 (+)
LOC110509604 LOC106562973 coding upstream 296387 10064167 ~ 10309768 (+)
LOC110509598 pe2r4 coding upstream 1239637 9309984 ~ 9366518 (+)
LOC118945275 LOC107691784 coding upstream 1396326 9209358 ~ 9209829 (+)
LOC110509594 rexo4 coding upstream 1464784 9137291 ~ 9141371 (+)
LOC110509315 LOC106562976 coding downstream 82906 10701054 ~ 10906165 (+)
LOC110509607 LOC106562980 coding downstream 356294 10974442 ~ 11003230 (+)
LOC110509610 LOC106562982 coding downstream 402922 11021070 ~ 11022671 (+)
LOC110509611 LOC106562983 coding downstream 407601 11025749 ~ 11044674 (+)
LOC100136324 sr-bi coding downstream 458317 11076465 ~ 11112463 (+)
G2150717 NA non-coding upstream 102233 10502671 ~ 10503922 (+)
G2150699 NA non-coding upstream 167394 10438445 ~ 10438761 (+)
G2150683 NA non-coding upstream 175621 10430228 ~ 10430534 (+)
G2150667 NA non-coding upstream 183385 10422474 ~ 10422770 (+)
G2150653 NA non-coding upstream 194457 10410980 ~ 10411698 (+)
G2150903 NA non-coding downstream 34779 10652927 ~ 10653402 (+)
G2150904 LOC106597055 non-coding downstream 36915 10655063 ~ 10655524 (+)
G2150910 NA non-coding downstream 58890 10677038 ~ 10677816 (+)
G2150914 NA non-coding downstream 63662 10681810 ~ 10682144 (+)
G2150918 NA non-coding downstream 74112 10692260 ~ 10692464 (+)
G2150729 NA other upstream 143935 10461753 ~ 10462220 (+)
G2149183 NA other upstream 1231643 9374000 ~ 9374512 (+)
LOC118945282 NA other upstream 1573860 8957803 ~ 9032295 (+)
G2146821 NA other upstream 2605665 8000129 ~ 8000490 (+)
G2151555 NA other downstream 742237 11359557 ~ 11432252 (+)
G2152150 NA other downstream 1146076 11764224 ~ 11766351 (+)
G2152639 NA other downstream 1682644 12300792 ~ 12307438 (+)
G2153316 NA other downstream 2141732 12759880 ~ 12760490 (+)
G2154294 NA other downstream 3050141 13668289 ~ 13669170 (+)

Expression


Co-expression Network