Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118945308 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 11190570 ~ 11193499 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: electrogenic sodium bicarbonate cotransporter 4-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005040443.1 | True | 663 | mRNA | 0.56 | 4 | 11190570 | 11193499 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509316 | LOC106563014 | coding | downstream | 31568 | 11139422 ~ 11159002 (-) |
| ddx56 | ddx56 | coding | downstream | 136741 | 11046317 ~ 11053829 (-) |
| LOC110509609 | LOC106562981 | coding | downstream | 172509 | 11004090 ~ 11018061 (-) |
| ttll11 | LOC106562979 | coding | downstream | 221255 | 10923070 ~ 10969315 (-) |
| LOC110509356 | NA | coding | downstream | 1132801 | 10051204 ~ 10057769 (-) |
| LOC110509613 | LOC106562989 | coding | upstream | 21979 | 11215478 ~ 11218956 (-) |
| LOC100136736 | LOC100136736 | coding | upstream | 39499 | 11232998 ~ 11236337 (-) |
| LOC100135966 | rps27a | coding | upstream | 48495 | 11241994 ~ 11244060 (-) |
| LOC110509318 | LOC106562994 | coding | upstream | 56770 | 11250269 ~ 11300824 (-) |
| LOC110509360 | myo18b | coding | upstream | 122144 | 11315643 ~ 11347641 (-) |
| G2151799 | NA | non-coding | downstream | 56874 | 11132594 ~ 11133696 (-) |
| G2151802 | NA | non-coding | downstream | 58076 | 11132140 ~ 11132494 (-) |
| G2151839 | NA | non-coding | downstream | 62767 | 11127602 ~ 11127803 (-) |
| G2151835 | NA | non-coding | downstream | 66592 | 11123726 ~ 11123978 (-) |
| G2151827 | NA | non-coding | downstream | 76187 | 11114034 ~ 11114383 (-) |
| G2151845 | NA | non-coding | upstream | 46274 | 11239773 ~ 11240108 (-) |
| G2151846 | NA | non-coding | upstream | 46713 | 11240212 ~ 11240547 (-) |
| G2151894 | NA | non-coding | upstream | 51737 | 11245236 ~ 11252463 (-) |
| LOC110512753 | LOC106568375 | non-coding | upstream | 159735 | 11351194 ~ 11448019 (-) |
| G2151771 | NA | other | downstream | 196691 | 10993166 ~ 10993879 (-) |
| G2151189 | NA | other | downstream | 391252 | 10718021 ~ 10799318 (-) |
| ttc33 | LOC106568686 | other | downstream | 1753033 | 9365212 ~ 9437537 (-) |
| LOC110509586 | LOC106562956 | other | downstream | 3022539 | 8130783 ~ 8168089 (-) |
| LOC110509625 | LOC106568355 | other | upstream | 263119 | 11456618 ~ 11525214 (-) |
| G2152107 | NA | other | upstream | 528573 | 11722072 ~ 11722479 (-) |
| atg10 | atg10 | other | upstream | 747963 | 11940630 ~ 11945825 (-) |
| G2153174 | NA | other | upstream | 1455677 | 12649176 ~ 12649495 (-) |
