trnaa-ugc-223


Basic Information

Item Value
gene id trnaa-ugc-223
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 11339299 ~ 11339370 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnaa-ugc-223
ggtgtagctcagttggtagagcatggcgcttgcaacgccagggttgtgggttcgattcccacggggggacca

Function

NR:

description
Deoxyribonuclease gamma precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaa-ugc-223 True 72 mRNA 0.61 1 11339299 11339370

Neighbor

gene id symbol gene type direction distance location
LOC110509616 LOC106563016 coding upstream 25325 11310457 ~ 11313974 (+)
LOC118945263 NA coding upstream 110678 11225076 ~ 11228621 (+)
LOC110509615 LOC106562990 coding upstream 123938 11206996 ~ 11215361 (+)
LOC110509317 LOC106562986 coding upstream 135008 11168585 ~ 11204291 (+)
LOC100136324 sr-bi coding upstream 226836 11076465 ~ 11112463 (+)
LOC110509623 crybb1 coding downstream 107024 11446394 ~ 11458975 (+)
LOC110509620 LOC106563087 coding downstream 120555 11459925 ~ 11464582 (+)
LOC118945340 NA coding downstream 196901 11536271 ~ 11560808 (+)
LOC118945334 NA coding downstream 221542 11560912 ~ 11570700 (+)
LOC110509626 LOC106563084 coding downstream 247162 11586532 ~ 11634525 (+)
G2151430 ubb non-coding upstream 96162 11241994 ~ 11243137 (+)
G2151436 NA non-coding upstream 98633 11239773 ~ 11240666 (+)
G2151469 NA non-coding upstream 104092 11235002 ~ 11235207 (+)
G2151468 NA non-coding upstream 104595 11234476 ~ 11234704 (+)
G2151466 NA non-coding upstream 108080 11231012 ~ 11231219 (+)
G2151471 NA non-coding downstream 13935 11353305 ~ 11354556 (+)
G2151557 NA non-coding downstream 19812 11359182 ~ 11399244 (+)
G2151555 NA non-coding downstream 20187 11359557 ~ 11432252 (+)
G2151568 NA non-coding downstream 72560 11411930 ~ 11412401 (+)
G2151577 NA non-coding downstream 86502 11425872 ~ 11437818 (+)
G2150729 NA other upstream 877079 10461753 ~ 10462220 (+)
LOC110509604 LOC106562973 other upstream 1030220 10064167 ~ 10309768 (+)
G2149183 NA other upstream 1964787 9374000 ~ 9374512 (+)
LOC118945282 NA other upstream 2307004 8957803 ~ 9032295 (+)
G2146821 NA other upstream 3338809 8000129 ~ 8000490 (+)
G2152150 NA other downstream 424854 11764224 ~ 11766351 (+)
G2152639 NA other downstream 961422 12300792 ~ 12307438 (+)
G2153316 NA other downstream 1420510 12759880 ~ 12760490 (+)
G2154294 NA other downstream 2328919 13668289 ~ 13669170 (+)

Expression


Co-expression Network