Item | Value |
---|---|
gene id | LOC110509320 |
gene name | cryba4 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048593.1 |
NCBI id | CM023247.2 |
chromosome length | 47748341 |
location | 11448974 ~ 11452011 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
symbol | description |
---|---|
cryba4 | Predicted to be a structural constituent of eye lens. Predicted to be involved in lens development in camera-type eye and visual perception. Is expressed in lens and solid lens vesicle. Human ortholog(s) of this gene implicated in cataract 23. Orthologous to human CRYBA4 (crystallin beta A4). |
description |
---|
beta-crystallin A4-like |
id | description |
---|---|
K23482 | CRYB; beta-crystallin |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036967339.1 | True | 743 | mRNA | 0.56 | 6 | 11448974 | 11452011 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110512753 | LOC106568375 | coding | downstream | 955 | 11351194 ~ 11448019 (-) |
LOC110509360 | myo18b | coding | downstream | 101333 | 11315643 ~ 11347641 (-) |
LOC110509319 | LOC106562995 | coding | downstream | 115445 | 11329949 ~ 11333529 (-) |
LOC110509318 | LOC106562994 | coding | downstream | 148150 | 11250269 ~ 11300824 (-) |
LOC100135966 | rps27a | coding | downstream | 204969 | 11241994 ~ 11244060 (-) |
LOC110509622 | NA | coding | upstream | 12833 | 11464844 ~ 11468057 (-) |
LOC118945324 | jelt | coding | upstream | 51147 | 11503158 ~ 11509942 (-) |
LOC110509625 | LOC106568355 | coding | upstream | 71442 | 11456618 ~ 11525214 (-) |
LOC110509627 | LOC106563113 | coding | upstream | 192022 | 11644033 ~ 11655110 (-) |
vcanb | LOC106568264 | coding | upstream | 401318 | 11853329 ~ 11884996 (-) |
G2151955 | NA | non-coding | downstream | 16066 | 11431821 ~ 11432908 (-) |
G2151953 | NA | non-coding | downstream | 20565 | 11426175 ~ 11428409 (-) |
G2151952 | NA | non-coding | downstream | 21461 | 11425887 ~ 11427513 (-) |
G2151954 | NA | non-coding | downstream | 21580 | 11426534 ~ 11427394 (-) |
G2151944 | NA | non-coding | downstream | 91259 | 11356760 ~ 11357715 (-) |
G2151963 | NA | non-coding | upstream | 1012 | 11453023 ~ 11453224 (-) |
G2152054 | NA | non-coding | upstream | 171581 | 11623592 ~ 11628058 (-) |
G2152055 | LOC107555460 | non-coding | upstream | 176510 | 11628521 ~ 11629395 (-) |
G2152011 | NA | non-coding | upstream | 181062 | 11633073 ~ 11637738 (-) |
G2152088 | NA | non-coding | upstream | 244315 | 11696326 ~ 11696563 (-) |
G2151771 | NA | other | downstream | 455095 | 10993166 ~ 10993879 (-) |
ttll11 | LOC106562979 | other | downstream | 479673 | 10923070 ~ 10969315 (-) |
G2151189 | NA | other | downstream | 649656 | 10718021 ~ 10799318 (-) |
ttc33 | LOC106568686 | other | downstream | 2011437 | 9365212 ~ 9437537 (-) |
G2152107 | NA | other | upstream | 270061 | 11722072 ~ 11722479 (-) |
atg10 | atg10 | other | upstream | 489451 | 11940630 ~ 11945825 (-) |
G2153174 | NA | other | upstream | 1197165 | 12649176 ~ 12649495 (-) |
G2153683 | NA | other | upstream | 1635442 | 13087453 ~ 13091356 (-) |