LOC118945324 (jelt)


Basic Information

Item Value
gene id LOC118945324
gene name jelt
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 11503158 ~ 11509942 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036968069.1
TTATTGTGCCTGGTCTCCTGAACGAGCCCTGATACAGTCTGTCAGAGCCAACAGGCTTATCAGGCCTTGGAGAAGCAGACAATTACTGGGCTATACAACAAATTAAGAAACGAAACTCTTTAGTAAGTGGGAAGCGAAACCCATAGCCACATGTTGATTGGGGCCGCTCTCACTCAGGATCTTACCTCTCTTAAACGCCTCACACTGCCAAAGCGTCTGACTCGAGAAGATGGATATGATTTCCGTGCTGTTCAACGCTCTCGCACTGCTGTCGGTGTTGGGACGAACTGGGGCAAGAACATCATCGCCCAATACAACCCCTTCAGGCCCAGGCCCCTCCACCTCAGACCTGCGTGGTCAGATGTTTACAGTGTCATATTCGTATAGCATAGGTTTCACCATGTACACAGACGcaatctttccctctccttcccccaccaTCTACCCTTCTCCTTCCACCTCTACttactcctccccttcctcctcctctgcctactctccctacccctctccttcctcctcctctccctcccccaccacctctccttcctcctccccttcctcctcctctgcctaCTCCTCTCCCTACCCTTCTCCTTCcacttctctttcctcctcctctgtctatTCCTCTTCCTACCCatctcctccttccacctctccttcctcctcctctgcctattcctctccctacccctctccttccacctctccttactcttcctctccctccccaagcacctccccctctccctcctccaccacctacccctctccttctccctcctcctctccctcgccctccaccaccacctacccctctccttctccttctccctcctctccctactcttctccttccacctctccttctccttccacctctcattctccctccacctctcgttctccctcctctccctactcttCTCCTTCCacctttccttctccctcctcttctccctcctccaccccttacCCCTCTcattcttcttctccctcctctccatacACCTCATATCCCTacaccaccccctctccctctctctctgctctgactgtgtgtctgcgTTACATGGCCGAGGAGGGAAAAGACTTGACTCTCTTCAGCCTCACTCAGGGGAACTACTGGAACCTGTTACTGGAAAGGAACAGTGGGATGGACTAcctctccatccattcctccTCTCAGTCCTTCCGCTCCTATAGGCTGCTGTGGTCCATCACAGAGCCACGCCCATGGACCAGCCTGTGCGTTACCTGGGAGAAAAACACGGGTGTAGCCCAGGTGTGGAGGGGCAGGACTGTCAGTATCAGGAAGAGAGTGTTTGGCCAGgtgaccaATGGGCCTCCTGTCTTGAAAGTGTATAAGTTTGAGGGGCAGGTAACTGACGTGGAAGTGTGGGACAGCGTCCTCTCCCCAAGCTGGATAATGTCCTACATGTCTGGGTGGCAGTCCTACTGGTCCTACGCCCCTGGTAATGTGCTGACCTGGTCCAAGGCCATCTACTCTACCAATGGTGAGGTTCTCCTAGAGAGAAACACCTACAACTCTGACCATCAGCCTATCAGAGGCCAGCACCCAAGACCAATGAGAAAGAAGAAAATGAGGAAATGTGAATGGAAGAAGAGAGCGAGGGCAGAGCAGATAGCGAGAACACGGCCGTAGGGGAGAGTAGTGATTGCCACTAACCCTTACTAAGATGTACAGTATGTTCCATCTTCATGTATGACCCAGCAATGCTCCTTACTTGTGAATCACACTGGATGAATGTCTGCTCAAATTATGATTCTGTGATTTCCCATGTTTGCCCTGATGGTCCCCAGGGTCAAATTAAGTGCTACTCTGGCTGATGTTCAGGTCGTTTGCCCCTTGCGTCTTCCATGTCTGTCAGCTAAGTATCTCCGCTAGCCAAGTGTGGACGTGAGCTCACCTAGCTAGCTATGATAGTGCTAACCGTTAGAGCTGTGGCACCACCTCCTCCCTGACGGAAAACACATCACACTTTATGCTCAGCACATAACCTGCCGGGGAAATCTGACCCAGCAGGCAAAATGAAAACCAATGAAATCAGCAGTTCTCAGGCAGGCTAGAAGCACAATATTGTTACTGTTGCATCACATTGGATGACCACAAGTAACTTAAGTTACATACTGCAGCTTTAAATTATTGTTAAAGGATTTAGTGTATTGTTAAATCATTTTAATGATTGCTAGATGATTTAAAAGATTGTTAAAATGAAGCACGTGGCAAATTAAAAGTCATTGGTGAGAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036968069.1 True 2276 mRNA 0.51 4 11503158 11509942

Neighbor

gene id symbol gene type direction distance location
LOC110509622 NA coding downstream 35101 11464844 ~ 11468057 (-)
LOC110509320 cryba4 coding downstream 51147 11448974 ~ 11452011 (-)
LOC110512753 LOC106568375 coding downstream 55139 11351194 ~ 11448019 (-)
LOC110509360 myo18b coding downstream 155517 11315643 ~ 11347641 (-)
LOC110509319 LOC106562995 coding downstream 169629 11329949 ~ 11333529 (-)
LOC110509625 LOC106568355 coding upstream 13511 11456618 ~ 11525214 (-)
LOC110509627 LOC106563113 coding upstream 134091 11644033 ~ 11655110 (-)
vcanb LOC106568264 coding upstream 343387 11853329 ~ 11884996 (-)
xrcc4 xrcc4 coding upstream 375749 11885691 ~ 11915884 (-)
atg10 atg10 coding upstream 430688 11940630 ~ 11945825 (-)
G2151963 NA non-coding downstream 49934 11453023 ~ 11453224 (-)
G2151955 NA non-coding downstream 70250 11431821 ~ 11432908 (-)
G2151953 NA non-coding downstream 74749 11426175 ~ 11428409 (-)
G2151952 NA non-coding downstream 75645 11425887 ~ 11427513 (-)
G2152054 NA non-coding upstream 113650 11623592 ~ 11628058 (-)
G2152055 LOC107555460 non-coding upstream 118579 11628521 ~ 11629395 (-)
G2152011 NA non-coding upstream 123131 11633073 ~ 11637738 (-)
G2152088 NA non-coding upstream 186384 11696326 ~ 11696563 (-)
G2152090 NA non-coding upstream 187014 11696956 ~ 11697288 (-)
LOC100135966 rps27a other downstream 259098 11241994 ~ 11244060 (-)
G2151771 NA other downstream 509279 10993166 ~ 10993879 (-)
ttll11 LOC106562979 other downstream 533857 10923070 ~ 10969315 (-)
G2151189 NA other downstream 703840 10718021 ~ 10799318 (-)
ttc33 LOC106568686 other downstream 2065621 9365212 ~ 9437537 (-)
G2152107 NA other upstream 212130 11722072 ~ 11722479 (-)
G2153174 NA other upstream 1139234 12649176 ~ 12649495 (-)
G2153683 NA other upstream 1577511 13087453 ~ 13091356 (-)
G2154361 LOC106563107 other upstream 2218891 13728833 ~ 13731096 (-)

Expression


Co-expression Network