tmem167a (tm167)


Basic Information

Item Value
gene id tmem167a
gene name tm167
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 11915756 ~ 11926319 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021590640.2
GATAGTTGGTTGTGTCTTTTAATATCCGATGGACGACTTCTGATACTTAAACCTACAACCGGTGTTAAATCTAGTTTAAATCGCCAGACGCCGCAGTTTCAGTTCGTCTCTTCCTTGTTCCGTACAACGTCATCTGTCTACGACGCTACGGAAGTGTGAGGTGGCGccgtagcagctagctagctagcatacctAGCTCCGACATGTCTGCCATATTTAACTTCCAGAGCCTGTTAACAGTGATCCTACTGCTCATCTGTACCTGTGCCTACCTCAGAGCCATGACCCCTAGTCTCCTGGACAAGAACAAGACCGGGTTCTTGGGTATCTTTTGGAAATGTTCCAGAATAGGTGAGAGGAAGAGTCCGTACGTGGCGGTTTGTTGTGTCATCATGgccctctccatcctcttctccGATTAACAGCCCGCCCTTCCCCGCACGCTATGCACTGTGGGATTCCTAGTGGAAGACTGAAGATGGCAGCAGTATGAGACCGCGATCGCAGAGGAGGCCTGCATGGGACACAGTTGTTTTTCCCCCCCAGTTTCTTTTGAGTGGGGTGTGGATAACGGATTGTAGTAACACACAAGGACCCTCTCTGGAGAACAACACAAGCATCCgtcttccatccctccttcctcctcttctcctggtGGCCATTTCACAATTCAGTTGTTAAAATGGCCTCCTGGACCTCTCTGTAAACagacagttgttgtttttttgttgttttcgtTGTCCTCTGTGTTATTATCCCGTAGGGATCGCCCCATGTCTTTCCCTCCCCTCTGATCTGTAATGAGGGCCATGGCCAGAGGTTGGAGAGCAGTGTTTGATAGTTGACAGTgttctttttgtgtgtgtttttctgtacATTAAAGACCCGGTGGATGAGACTACTCGACCACTGTTGACGGTCCAACTCATGCCTTTCTATAA
>TU2460984
GCACTAGCCTTCTTTAGATAGTTGGTTGTGTCTTTTAATATCCGATGGACGACTTCTGATACTTAAACCTACAACCGGTGTTAAATCTAGTTTAAATCGCCAGACGCCGCAGTTTCAGTTCGTCTCTTCCTTGTTCCGTACAACGTCATCTGTCTACGACGCTACGGAAGTGTGAGGTGGCGccgtagcagctagctagctagcatacctAGCTCCGACATGTCTGCCATATTTAACTTCCAGAGCCTGTTAACAGTGATCCTACTGCTCATCTGTACCTGTGCCTACCTCAGAGCCATGACCCCTAGTCTCCTGGACAAGAACAAGACCGGGTTCTTGGGTATCTTTTGGAAATGTTCCAGAATAGGTGAGAGGAAGAGTCCGTACGTGGCGGTTTGTTGTGTCATCATGgccctctccatcctcttctccGATTAACAGCCCGCCCTTCCCCGCACGCTATGCACTGTGGGATTCCTAGTGGAAGACTGAAGATGGCAGCAGTATGAGACCGCGATCGCAGAGGAGGCCTGCATGGGACACAGTTGTTTTTCCCCCCCAGTTTCTTTTGAGTGGGGTGTGGATAACGGATTGTAGTAACACACAAGGACCCTCTCTGGAGAACAACACAAGCATCCgtcttccatccctccttcctcctcttctcctggtGGCCATTTCACAATTCAGTTGTTAAAATGGCCTCCTGGACCTCTCTGTAAACagacagttgttgtttttttgttgttttcgtTGTCCTCTGTGTTATTATCCCGTAGGGATCGCCCCATGTCTTTCCCTCCCCTCTGATCTGTAATGAGGGCCATGGCCAGAGGTTGGAGAGCAGTGTTTGATAGTTGACAGTgttctttttgtgtgtgtttttctgtacATTAAAGACCCGGTGGATGAGACTACTCGACCACTGTTGACGGTCCAACTCATGCCTTTCTATAA
>TU2460979
CGCTACGGAAGTGTGAGGTGGCGccgtagcagctagctagctagcatacctAGCTCCGACATGTCTGCCATATTTAACTTCCAGAGCCTGTTAACAGTGATCCTACTGCTCATCTGTACCTGTGCCTACCTCAGAGCCATGACCCCTAGTCTCCTGGACAAGAACAAGACCGGGTTCTTGGGTATCTTTTGGAAATGTTCCAGAATAGGTGAGAGGAAGAGTCCGTACGTGGCGGTTTGTTGTGTCATCATGgccctctccatcctcttctccGATTAACAGCCCGCCCTTCCCCGCACGCTATGCACTGTGGGATTCCTAGTGGAAGACTGAAGATGGCAGCAGTATGAGACCGCGATCGCAGAGGAGGCCTGCATGGGACACAGTTGTTTTTCCCCCCCAGTTTCTTTTGAGTGGGGTGTGGATAACGGATTGTAGTAACACACAAGGACCCTCTCTGGAGAACAACACAAGCATCCgtcttccatccctccttcctcctcttctcctggtGGCCATTTCACAATTCAGTTGTTAAAATGGCCTCCTGGACCTCTCTGTAAACagacagttgttgtttttttgttgttttcgtTGTCCTCTGTGTTATTATCCCGTAGGGATCGCCCCATGTCTTTCCCTCCCCTCTGATCTGTAATGAGGGCCATGGCCAGAGGTTGGAGAGCAGTGTTTGATAGTTGACAGTgttctttttgtgtgtgtttttctgtacATTAAAGACCCGGTGGATGAGACTACTCGACCACTGTTGACGGTCCAACTCATGCCTTTCTATAACACGGGAGTCTGTTTTTCTTTTTCTCATTGATCACGGGGTGTATGTATGTTAccaagcaggatcaatgagtttgCCTAGCCAGTTCACTTTCCAAAATATTCTTGACGTATTAACTCTGTATTCAACTTATGTTCTCTT
>TU2460980
CGCTACGGAAGTGTGAGGTGGCGccgtagcagctagctagctagcatacctAGCTCCGACATGTCTGCCATATTTAACTTCCAGAGCCTGTTAACAGTGATCCTACTGCTCATCTGTACCTGTGCCTACCTCAGAGCCATGACCCCTAGTCTCCTGGACAAGAACAAGACCGGGTTCTTGGGTATCTTTTGGAAATGTTCCAGAATAGGTGAGAGGAAGAGTCCGTACGTGGCGGTTTGTTGTGTCATCATGgccctctccatcctcttctccGATTAACAGCCCGCCCTTCCCCGCACGCTATGCACTGTGGGATTCCTAGTGGAAGACTGAAGATGGCAGCAGTATGAGACCGCGATCGCAGAGGAGGCCTGCATGGGACACAGTTGTTTTTCCCCCCCAGTTTCTTTTGAGTGGGGTGTGGATAACGGATTGTAGTAACACACAAGGACCCTCTCTGGAGAACAACACAAGCATCCgtcttccatccctccttcctcctcttctcctggtGGCCATTTCACAATTCAGTTGTTAAAATGGCCTCCTGGACCTCTCTGTAAACagacagttgttgtttttttgttgttttcgtTGTCCTCTGTGTTATTATCCCGTAGGGATCGCCCCATGTCTTTCCCTCCCCTCTGATCTGTAATGAGGGCCATGGCCAGAGGTTGGAGAGCAGTGTTTGATAGTTGACAGTgttctttttgtgtgtgtttttctgtacATTAAAGACCCGGTGGATGAGACTACTCGACCACTGTTGACGGTCCAACTCATGCCTTTCTATAA
>TU2460981
GTGGCGccgtagcagctagctagctagcatacctAGCTCCGACATGTCTGCCATATTTAACTTCCAGAGCCTGTTAACAGTGATCCTACTGCTCATCTGTACCTGTGCCTACCTCAGAGCCATGACCCCTAGTCTCCTGGACAAGAACAAGACCGGGTTCTTGGGTATCTTTTGGAAATGTTCCAGAATAGGTGAGAGGAAGAGTCCGTACGTGGCGGTTTGTTGTGTCATCATGgccctctccatcctcttctccGATTAACAGCCCGCCCTTCCCCGCACGCTATGCACTGTGGGATTCCTAGTGGAAGACTGAAGATGGCAGCAGTATGAGACCGCGATCGCAGAGGAGGCCTGCATGGGACACAGTTGTTTTTCCCCCCCAGTTTCTTTTGAGTGGGGTGTGGATAACGGATTGTAGTAACACACAAGGACCCTCTCTGGAGAACAACACAAGCATCCgtcttccatccctccttcctcctcttctcctggtGGCCATTTCACAATTCAGTTGTTAAAATGGCCTCCTGGACCTCTCTGTAAACagacagttgttgtttttttgttgttttcgtTGTCCTCTGTGTTATTATCCCGTAGGGATCGCCCCATGTCTTTCCCTCCCCTCTGATCTGTAATGAGGGCCATGGCCAGAGGTTGGAGAGCAGTGTTTGATAGTTGACAGTgttctttttgtgtgtgtttttctgtacATTAAAGACCCGGTGGATGAGACTACTCGACCACTGTTGACGGTCCAACTCATGCCTTTCTATAACACGGGAGTCTGTTTTTCTTTTTCTCATTGATCACGGGGTGTATGTATGTTAccaagcaggatcaatgagtttgCCTAGCCAGTTCACTTTCCAAAATATTCTTGACGTATTAACTCTGTATTCAACTTATGTTCTCTTTCCCATtcaaaaaataagtatttgattaGTGTTACCTAGTTAGCTGATCGATCCTGCTTGGTGAAACACAACCCTGTGGTTGAGGTTCCAGGTTGTCTTTATTGCAGTcgtgatcaaatcaaatggtattttgtgacatgcgccgaatacaaccttacagtgaaatgaagacaacagtgaaatgctacttacaagcccttaaccaacgatgATGTTTTAAgaaaacaaaacattaaaaagttaaagagcagcagtaaaataacaatagtgaggctatatacagtggg
>TU2460982
GTGGCGccgtagcagctagctagctagcatacctAGCTCCGACATGTCTGCCATATTTAACTTCCAGAGCCTGTTAACAGTGATCCTACTGCTCATCTGTACCTGTGCCTACCTCAGAGCCATGACCCCTAGTCTCCTGGACAAGAACAAGACCGGGTTCTTGGGTATCTTTTGGAAATGTTCCAGAATAGGTGAGAGGAAGAGTCCGTACGTGGCGGTTTGTTGTGTCATCATGgccctctccatcctcttctccGATTAACAGCCCGCCCTTCCCCGCACGCTATGCACTGTGGGATTCCTAGTGGAAGACTGAAGATGGCAGCAGTATGAGACCGCGATCGCAGAGGAGGCCTGCATGGGACACAGTTGTTTTTCCCCCCCAGTTTCTTTTGAGTGGGGTGTGGATAACGGATTGTAGTAACACACAAGGACCCTCTCTGGAGAACAACACAAGCATCCgtcttccatccctccttcctcctcttctcctggtGGCCATTTCACAATTCAGTTGTTAAAATGGCCTCCTGGACCTCTCTGTAAACagacagttgttgtttttttgttgttttcgtTGTCCTCTGTGTTATTATCCCGTAGGGATCGCCCCATGTCTTTCCCTCCCCTCTGATCTGTAATGAGGGCCATGGCCAGAGGTTGGAGAGCAGTGTTTGATAGTTGACAGTgttctttttgtgtgtgtttttctgtacATTAAAGACCCGGTGGATGAGACTACTCGACCACTGTTGACGGTCCAACTCATGCCTTTCTATAA
>TU2460983
GTGGCGccgtagcagctagctagctagcatacctAGCTCCGACATGTCTGCCATATTTAACTTCCAGAGCCTGTTAACAGTGATCCTACTGCTCATCTGTACCTGTGCCTACCTCAGAGCCATGACCCCTAGTCTCCTGGACAAGAACAAGACCGGGTTCTTGGGTATCTTTTGGAAATGTTCCAGAATAGGTGAGAGGAAGAGTCCGTACGTGGCGGTTTGTTGTGTCATCATGgccctctccatcctcttctccGATTAACAGCCCGCCCTTCCCCGCACGCTATGCACTGTGGGATTCCTAGTGGAAGACTGAAGATGGCAGCAGTATGAGACCGCGATCGCAGAGGAGGCCTGCATGGGACACAGTTGTTTTTCCCCCCCAGTTTCTTTTGAGTGGGGTGTGGATAACGGATTGTAGTAACACACAAGGACCCTCTCTGGAGAACAACACAAGCATCCgtcttccatccctccttcctcctcttctcctggtGGCCATTTCACAATTCAGTTGTTAAAATGGCCTCCTGGACCTCTCTGTAAACagacagttgttgtttttttgttgttttcgtTGTCCTCTGTGTTATTATCCCGTAGGGATCGCCCCATGTCTTTCCCTCCCCTCTGATCTGTAATGAGGGCCATGGCCAGAGGTTGGAGAGCAGTGTTTGATAGTTGACAGTgttctttttgtgtgtgtttttctgtacATTAAAGACCCGGTGGATGAGACTACTCGACCACTGTTGACGGTCCAACTCATGCCTTTCTATAACACGGGAGTCTGTTTTTCTTTTTCTCATTGATCACGGGGTGTATGTATGTTAccaagcaggatcaatgagtttgCCTAGCCAGTTCACTTTCCAAAATATTCTTGACGTATTAACTCTGTATTCAACTTATGTTCTCTTTCCCATtcaaaaaataagtatttgattaGTGTTACCTAGTTAGCTGATCGATCCTGCTTGGTGAAACACAACCCTGTGGTTGAGGTTCCAGGTTGTCTTTATTGCAGTcgtgatcaaatcaaatggtattttgtgacatgcgccgaatacaaccttacagtgaaatgaagacaacagttgtagaccttacagtgaaatgctacttacaagcccttaaccaacgatgATGTTTTAAgaaaacaaaacattaaaaagttaaagagcagcagtaaaataacaatagtgaggctatatacagtggg
>TU2460985
GTGGCGccgtagcagctagctagctagcatacctAGCTCCGACATGTCTGCCATATTTAACTTCCAGAGCCTGTTAACAGTGATCCTACTGCTCATCTGTACCTGTGCCTACCTCAGAGCCATGACCCCTAGTCTCCTGGACAAGAACAAGACCGGGTTCTTGGGTATCTTTTGGAAATGTTCCAGAATAGGTGAGAGGAAGAGTCCGTACGTGGCGGTTTGTTGTGTCATCATGgccctctccatcctcttctccGATTAACAGCCCGCCCTTCCCCGCACGCTATGCACTGTGGGATTCCTAGTGGAAGACTGAAGATGGCAGCAGTATGAGACCGCGATCGCAGAGGAGGCCTGCATGGGACACAGTTGTTTTTCCCCCCCAGTTTCTTTTGAGTGGGGTGTGGATAACGGATTGTAGTAACACACAAGGACCCTCTCTGGAGAACAACACAAGCATCCgtcttccatccctccttcctcctcttctcctggtGGCCATTTCACAATTCAGTTGTTAAAATGGCCTCCTGGACCTCTCTGTAAACagacagttgttgtttttttgttgttttcgtTGTCCTCTGTGTTATTATCCCGTAGGGATCGCCCCATGTCTTTCCCTCCCCTCTGATCTGTAATGAGGGCCATGGCCAGAGGTTGGAGAGCAGTGTTTGATAGTTGACAGTgttctttttgtgtgtgtttttctgtacATTAAAGACCCGGTGGATGAGACTACTCGACCACTGTTGACGGTCCAACTCATGCCTTTCTATAACACGGGAGTCTGTTTTTCTTTTTCTCATTGATCACGGGGTGTATGTATGTTAccaagcaggatcaatgagtttgCCTAGCCAGTTCACTTTCCAAAATATTCTTGACGTATTAACTCTGTATTCAACTTATGTTCTCTTTCCCATtcaaaaaataagtatttgattaGTGTTACCTAGTTAGCTGATCGATCCTGCTTGGTGAAACACAACCCTGTGGTTGAGGTTCCAGGTTGTCTTTATTGCAGTcgtgatcaaatcaaatggtattttgtgacatgcgccgaatacaaccttacagtgaaatgaagacaacagttgtagaccttacagtgaaataatgaatACAactccttacagtgaaatgatgaagacaccaggtgtagaccttacagtgaaatgctacttacaagcccttaaccaacgatgATGTTTTAAgaaaacaaaacattaaaaagttaaagagcagcagtaaaataacaatagtgaggctatatacagtggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021590640.2 False 941 mRNA 0.49 4 11915772 11925460
TU2460984 False 957 lncRNA 0.49 4 11915756 11925460
TU2460979 False 937 lncRNA 0.48 4 11915915 11925599
TU2460980 False 798 lncRNA 0.50 4 11915915 11925460
TU2460981 False 1207 lncRNA 0.45 5 11915932 11926319
TU2460982 False 781 lncRNA 0.50 4 11915932 11925460
TU2460983 False 1222 lncRNA 0.45 5 11915932 11926319
TU2460985 True 1284 lncRNA 0.45 5 11915932 11926319

Neighbor

gene id symbol gene type direction distance location
hapln1b hapln1 coding upstream 65463 11821247 ~ 11852482 (+)
edil3b edil3 coding upstream 120274 11776851 ~ 11795498 (+)
mef2ca LOC106563077 coding upstream 139768 11742203 ~ 11834606 (+)
cetn3 LOC106563079 coding upstream 195459 11716684 ~ 11720313 (+)
arrdc3b LOC106563080 coding upstream 222693 11685350 ~ 11693079 (+)
LOC110509638 NA coding downstream 23129 11948589 ~ 11951596 (+)
LOC110509639 NA coding downstream 30164 11955624 ~ 11961875 (+)
LOC110509640 LOC106563068 coding downstream 53981 11979441 ~ 11984838 (+)
LOC118945327 NA coding downstream 124982 12050442 ~ 12053419 (+)
wdr45 wdr45 coding downstream 187676 12113136 ~ 12116480 (+)
G2152213 xrcc4 non-coding upstream 1490 11908620 ~ 11914282 (+)
G2152201 NA non-coding upstream 27239 11886553 ~ 11888533 (+)
G2152193 NA non-coding upstream 44051 11871077 ~ 11871721 (+)
G2152259 NA non-coding downstream 80128 12005588 ~ 12005877 (+)
G2152271 NA non-coding downstream 96426 12021886 ~ 12022594 (+)
G2152443 NA non-coding downstream 99052 12024512 ~ 12024735 (+)
G2152484 NA non-coding downstream 120976 12046436 ~ 12046778 (+)
G2152150 NA other upstream 149421 11764224 ~ 11766351 (+)
G2151555 NA other upstream 549280 11359557 ~ 11432252 (+)
G2150729 NA other upstream 1453552 10461753 ~ 10462220 (+)
LOC110509604 LOC106562973 other upstream 1606693 10064167 ~ 10309768 (+)
G2149183 NA other upstream 2541260 9374000 ~ 9374512 (+)
G2152639 NA other downstream 375332 12300792 ~ 12307438 (+)
G2153316 NA other downstream 834420 12759880 ~ 12760490 (+)
G2154294 NA other downstream 1742829 13668289 ~ 13669170 (+)
G2154391 NA other downstream 1847248 13772708 ~ 13776134 (+)
G2154438 NA other downstream 1880553 13806013 ~ 13813970 (+)
G2152148 NA non-coding upstream 152831 11761826 ~ 11762925 (+)

Expression


Co-expression Network