LOC110509362


Basic Information

Item Value
gene id LOC110509362
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 12726130 ~ 12726962 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002471426.2
TCACCATCTATGCATCCATCCACACTGTTGTTACTTGGATGTAGTTTACTTTACTTTATAAATATGTTTGTCATTTCTTtatctccctttgttacgggctatGAGCCGGTTCGTAACAGTATGATATAGCactttctagctctgagtctctgcttttatccaacgTTAAAAACagcatttcaaattttgctacataggaccgaatccaggtggtgggtCACAATTGTGTCAAACCACCCAATTATTGAGAAGAAACAGCATCATTCATCAACAGATTACAAGAAAAATAATGCCTGGACTACCTATTTGTAATGAATTAAACGCAAATGAAAAAGCCAACAAAAGGATGCTTCGgGTCCTGTGGAAAAACATAAAAATCGACTTAAAGAAGACAATTGCAGTTGCTCGTAGGGAGAGTTTCAAGACTGGTGGCAGACTCCCATTAAGACCGGAGACAAATGAGCTGGGGGATTTGATGACCGTGATCATTGATAGCCAGCAACCCCTGGAAGGTATCTCCGATGATGACCATTTGGACAGTTCAGATTGGGGACCTTTCCAATCCTCATTTGGTAGGACACATTCATTCAACATGTGCCACACCCCAGACTGCAGGGAAAATTGAATGTTGTCAGTCATCTCTTGGACTCCCAAAATAAAAATGATGTATTGAACTCAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002471426.2 True 679 mRNA 0.41 2 12726130 12726962

Neighbor

gene id symbol gene type direction distance location
gfra2b LOC106563053 coding downstream 98992 12557132 ~ 12627138 (-)
LOC110509322 LOC106568012 coding downstream 362251 12353675 ~ 12363879 (-)
zgc:86599 LOC106567989 coding downstream 405173 12313141 ~ 12320957 (-)
npy8ar LOC106563058 coding downstream 462987 12237703 ~ 12263143 (-)
march5l LOC106563060 coding downstream 525087 12195098 ~ 12201043 (-)
LOC110509658 LOC106563051 coding upstream 54882 12781844 ~ 12786031 (-)
LOC110509659 LOC106563050 coding upstream 255168 12982130 ~ 13001842 (-)
trnag-ccc-7 NA coding upstream 275027 13001989 ~ 13002059 (-)
LOC110509662 LOC106563046 coding upstream 364692 13091654 ~ 13150475 (-)
LOC110509664 bhmt coding upstream 438578 13165540 ~ 13171705 (-)
G2153209 NA non-coding downstream 54021 12671809 ~ 12672109 (-)
G2153194 NA non-coding downstream 63240 12662649 ~ 12662890 (-)
G2153176 NA non-coding downstream 75730 12650067 ~ 12650400 (-)
G2153165 NA non-coding downstream 85108 12640788 ~ 12641022 (-)
G2153162 NA non-coding downstream 87460 12638373 ~ 12638670 (-)
G2153296 NA non-coding upstream 10209 12737171 ~ 12737376 (-)
G2153298 NA non-coding upstream 10803 12737765 ~ 12738109 (-)
G2153308 NA non-coding upstream 20589 12747551 ~ 12747958 (-)
G2153314 NA non-coding upstream 21326 12748288 ~ 12756988 (-)
G2153317 NA non-coding upstream 32861 12759823 ~ 12760755 (-)
G2153174 NA other downstream 76635 12649176 ~ 12649495 (-)
atg10 atg10 other downstream 781977 11940630 ~ 11945825 (-)
G2152107 NA other downstream 1003651 11722072 ~ 11722479 (-)
LOC110509625 LOC106568355 other downstream 1200978 11456618 ~ 11525214 (-)
LOC100135966 rps27a other downstream 1482070 11241994 ~ 11244060 (-)
G2153683 NA other upstream 360491 13087453 ~ 13091356 (-)
G2154361 LOC106563107 other upstream 1001871 13728833 ~ 13731096 (-)
G2154418 LOC106563033 other upstream 1053697 13780659 ~ 13782254 (-)
G2154637 NA other upstream 1273563 14000525 ~ 14010167 (-)
cdc26 cdc26 other upstream 1301363 14028310 ~ 14030112 (-)

Expression


Co-expression Network