Gene
RNA
| Item | Value |
|---|---|
| gene id | atp6v1g1 |
| gene name | LOC106563029 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 14000254 ~ 14010168 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: V-type proton ATPase subunit G 1-like |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0055085 | transmembrane transport | biological_process |
| GO:0016471 | vacuolar proton-transporting V-type ATPase complex | cellular_component |
| id | description |
|---|---|
| K02152 | ATPeV1G, ATP6G; V-type H+-transporting ATPase subunit G |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021590705.2 | True | 1253 | mRNA | 0.43 | 4 | 14000254 | 14010168 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509680 | LOC106563031 | coding | upstream | 3801 | 13958633 ~ 13996453 (+) |
| LOC110509328 | LOC106563105 | coding | upstream | 57826 | 13940187 ~ 13942428 (+) |
| LOC110509678 | LOC106563033 | coding | upstream | 217549 | 13779399 ~ 13782705 (+) |
| LOC110509676 | NA | coding | upstream | 252795 | 13745413 ~ 13747459 (+) |
| LOC110509673 | LOC106563107 | coding | upstream | 269143 | 13728812 ~ 13731111 (+) |
| slc31a1 | LOC106563027 | coding | downstream | 4874 | 14015042 ~ 14028322 (+) |
| prpf4 | prpf4 | coding | downstream | 25154 | 14035322 ~ 14041282 (+) |
| LOC118945712 | NA | coding | downstream | 29168 | 14039336 ~ 14039471 (+) |
| LOC118945711 | NA | coding | downstream | 30266 | 14040434 ~ 14040567 (+) |
| LOC110509688 | LOC106563021 | coding | downstream | 161631 | 14171799 ~ 14175996 (+) |
| G2154533 | NA | non-coding | upstream | 18603 | 13946469 ~ 13981651 (+) |
| G2154512 | NA | non-coding | upstream | 64435 | 13915670 ~ 13935819 (+) |
| G2154396 | NA | non-coding | upstream | 213539 | 13786515 ~ 13786715 (+) |
| G2154384 | NA | non-coding | upstream | 233685 | 13766276 ~ 13766569 (+) |
| G2154564 | NA | non-coding | downstream | 2713 | 14012881 ~ 14013081 (+) |
| G2154565 | NA | non-coding | downstream | 3048 | 14013216 ~ 14013423 (+) |
| G2154573 | NA | non-coding | downstream | 34002 | 14044170 ~ 14044421 (+) |
| G2154574 | NA | non-coding | downstream | 34285 | 14044453 ~ 14044814 (+) |
| G2154575 | NA | non-coding | downstream | 34797 | 14044965 ~ 14045498 (+) |
| G2154438 | NA | other | upstream | 186284 | 13806013 ~ 13813970 (+) |
| G2154391 | NA | other | upstream | 224120 | 13772708 ~ 13776134 (+) |
| G2154294 | NA | other | upstream | 331084 | 13668289 ~ 13669170 (+) |
| G2153316 | NA | other | upstream | 1239764 | 12759880 ~ 12760490 (+) |
| G2155696 | NA | other | downstream | 1008459 | 15018627 ~ 15093949 (+) |
| G2157602 | NA | other | downstream | 2340549 | 16350717 ~ 16353665 (+) |
| G2158499 | LOC106563144 | other | downstream | 3179176 | 17189344 ~ 17191128 (+) |
| LOC110509751 | LOC106563328 | other | downstream | 5050375 | 18962089 ~ 19065920 (+) |
| LOC118945267 | NA | other | downstream | 5056010 | 19066137 ~ 19068784 (+) |
