LOC118945712



Basic Information


Item Value
gene id LOC118945712
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 14039336 ~ 14039471 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XR_005040827.1
TGGAGGACTGAGAAGGTTTAGCAGCTTGTTCTGTGCTGTTATAACTGGTTATAACCTCCTAAATGAACATAAGTCAGATGCGACAAACCGGCTACATGTGACACATTAGAGCTGGCGTTGTGTTTGTGTACAGATC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XR_005040827.1 True 136 mRNA 0.43 1 14039336 14039471

Neighbor


gene id symbol gene type direction distance location
slc31a1 LOC106563027 coding upstream 11014 14015042 ~ 14028322 (+)
atp6v1g1 LOC106563029 coding upstream 29168 14000254 ~ 14010168 (+)
LOC110509680 LOC106563031 coding upstream 42883 13958633 ~ 13996453 (+)
LOC110509328 LOC106563105 coding upstream 96908 13940187 ~ 13942428 (+)
LOC110509678 LOC106563033 coding upstream 256631 13779399 ~ 13782705 (+)
LOC118945711 NA coding downstream 963 14040434 ~ 14040567 (+)
LOC110509688 LOC106563021 coding downstream 132328 14171799 ~ 14175996 (+)
LOC110509690 LOC106563020 coding downstream 175651 14215122 ~ 14231240 (+)
LOC110509691 LOC106563019 coding downstream 249741 14289212 ~ 14396808 (+)
LOC110509696 LOC106563151 coding downstream 746516 14785987 ~ 14806264 (+)
G2154565 NA non-coding upstream 25913 14013216 ~ 14013423 (+)
G2154564 NA non-coding upstream 26255 14012881 ~ 14013081 (+)
G2154533 NA non-coding upstream 57685 13946469 ~ 13981651 (+)
G2154512 NA non-coding upstream 103517 13915670 ~ 13935819 (+)
G2154396 NA non-coding upstream 252621 13786515 ~ 13786715 (+)
G2154573 NA non-coding downstream 4699 14044170 ~ 14044421 (+)
G2154574 NA non-coding downstream 4982 14044453 ~ 14044814 (+)
G2154575 NA non-coding downstream 5494 14044965 ~ 14045498 (+)
G2154750 LOC106563023 non-coding downstream 30782 14070253 ~ 14071153 (+)
G2154823 NA non-coding downstream 161412 14200883 ~ 14201383 (+)
G2154438 NA other upstream 225366 13806013 ~ 13813970 (+)
G2154391 NA other upstream 263202 13772708 ~ 13776134 (+)
G2154294 NA other upstream 370166 13668289 ~ 13669170 (+)
G2153316 NA other upstream 1278846 12759880 ~ 12760490 (+)
G2155696 NA other downstream 979156 15018627 ~ 15093949 (+)
G2157602 NA other downstream 2311246 16350717 ~ 16353665 (+)
G2158499 LOC106563144 other downstream 3149873 17189344 ~ 17191128 (+)
LOC110509751 LOC106563328 other downstream 5021072 18962089 ~ 19065920 (+)
LOC118945267 NA other downstream 5026707 19066137 ~ 19068784 (+)

Expression



Co-expression Network