LOC110509696 (LOC106563151)


Basic Information

Item Value
gene id LOC110509696
gene name LOC106563151
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 14785987 ~ 14806264 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021590738.2
TGACTGTAAGCAATTTGagttaaactttttttttgttcACTTTAAGCACTTGCCCCTACAAAGGTCTGTGCAAAGGTCTGTGTTGTGTTCTTAGTGGGTATTTGTTGTTTTTCAGAGAATTGCGAATACAATTCCTTGAAAGCAGAGAGAGAACTTGTTAGAAATCCTGAAATAGCTGAAACTTGGGCTATTTCTTTGTCTGAGTAACACTCAGTTCATACCAGTCATTTGTTCTGAATAGAAAAGAGAAGTCAACTCATCCAGATagattttcatttttttctctctcttgctctctttctgtgGGCTTGCGCATGTGGGTGGTGAGCACACATGAATGGTTAGCTACTGCTCATCAAGCCACTTCAACACCACACAGACCTTCTTGGCTGTCAGACACAAAACCAGTCAGACATCAAATATGGCTATGAATGTGATGCTGTGACTTGGAGCTCTATTCTATGAGACACAAAGACCAACAATGCATTTTCTGCACAAACCTCTGCCCTACTTACTCTTTGGTGTTCTCTTTGAATATTTTACCACActctgttcccctctccaagTTTCTCCAGTGTCCTGTGGGTCCAAGAATATCTCTTCATATTACGGACACTGTGTCACATCCCAAGAGGGAGTCCGTGAATTAGTTTGCTTTGTACCTATGGGCTTAAGTAGGAATGGCTGGGAATGTGTGTGGACACCTAGAAAGCATCTTGTCTaccaaacacacagatacacactcaTTATAGAACAGAAAATGATTCACCATTGCAAAATGTATGCAAACATATCAGGTACATCTCAGACTTTCAATAATCTGTCAAAAAAACGCAACATGACGGCTCAGGTGTTTGACGAGAGTGATCCGAAGAGCTGCACAAAGGACGTTTTCAGAGGTTCACCTCAACAATTGGTTCGATGCGGCCCTCCATCTAACGTCGACTTAAATCGCCATTCAAGACAGCTGGATATCCAGGCCTcctggaggaaggaggagaacaAATATATTGCGCTGTACTCTGTGAGGTACAAGGACCTGAAGAGCCAGTCATGGAAAGAGCCACCAGTGCAATCCAAGGATAGCAATAGGTGCTCTCTGGGTAATCTTAACTCCTCACTGTCCTATGTGGTGCAAATACAGTGTGTGGCCAACAACAAATGTACCCAGTGCCCCTGGAGCAAGAATTTCACTGTTCCACCTGAACTTACTGATAAGCCTGTCATTGAGATGGTAGAAGATTTTCCACAAACCAAAGGAAGTAGATTAGTGATCATAAAATGGAAGTTTGCAGCCAGTGAGTTAGCGGAGGGCTACAGTGTGACAGTGGGGAAGGCCTCAGGAGAGGACCCCATTGAGGCCTTCAACACCAGCAGGACCCTACTCCGACTGGCCCTGTCTCACTCAGCCTACCACCTCACTATCACAGCCTTCAACAAGGCGGGGAACTCACCTGCAGCACAAAGAACTATACCTCCACTGGACGACAAAGACTTATATGGGAGGCTGAATGTGACATTCAATGGCAACACGTCCTTCACTGTCTCCTGGGTGGATGACCTGATCAAAACCTACTCCTGCTTCTCAGTGgagtggtggaggagaggagagaaagctgCTCACAAGTCCTTCTATGAGGATGAGAACAACTATGAAGTCATACACTTGGAGGAGCCATTAGAGCTGTATAAGAAGTACACTTTCACTCTGCACACAAGGCCACATAAAGAACCCTGCAACCTGAAGTTCATCAATAACAGCGAGAGCACCTATGGGAGCATCCAGTCCTTCTTCACTGAAGGATCCCCCATCAGTGCCCCAGGGAACATCAGCAGCAGTAATGTTAGCCAGAGTTCCATGGTGCTGGAGTGGACGGCTGTCCCCGAGGAGGACAATAGAGGTTTCCTGCTGGGCTACTTCCTCCATTACACAGAGAGGCTGCAGGACTGGACAGATACTGAACCAAACATCACTGTGGATGCTGGTTCAACCAGCTATGAGTTGGTAGACCTACAGAGCAGTACTGTGTACCGGGTCCAGTTGTCTGCCTTCACTGGTGCAGGAATGGGAGTGAGAAGCTCAGCTGCATACTTTGAAACCAAACCTGAAGCATCCCTGACTGTGGGTGGTGTGATAGCGGGGGCCATTGTTGGAGTAACTTTACTCTTACTGGTGGTTCATCTCGGCTCTCAGTTGTTAAAAAGAGCAAAGAAACTACTTTGGCCAAATATCCCCAATCCAGGTAACAGCAATGCCATCCAGAAAATAGATGGGGTCTGCGATCTGGAACTCCTGGAGCTCATCAACCGACAGATGTtgaaagaagaggagggggacTCCAACAGTCTACACATTGTCAATGGAAGAGAAGAAATGTCTCCCGTTGGCAACCTCCATCGCAATGCTGACTCATGTCTACACCTCAACACAGACCATGGGGAGAGCCAAGGGCCTTCTCTGTCAACCATAGCCACAGACAGAGCTCAAGATCCAACTTCTGACACCATTACATCTATTCccacagacatgagacagacagaccctgtccTCATCAGTACGGTGGCCCACCAGTGCCACCCGTTGGCCTTTCTAAGTGATTACACCACCATGGAACTCTTCCAACAGGCTATGCCACACTGTGTTCCAACCAATACGTCGTCATCATTGGAATCCCAGGATCAGTCAAGCCAGATCAGTCAAGCCAGATCAGTCAAGCCAGGCCAGAGTTAGATTACATCCACCAGACACAACGCAGCACCAGTCCATCTCTGAACACTAAGGTGGTTCTTTGAGAATGTTTACTGTAGATTCTAGAATCTGCTTTTCTCACTGAGATGCTGTGCAACCATTCTAGGCCTTTCTCTATGTAACAGAGCCACCGGCTGCCATCAGTGTCACCCTGTTAACCAGCATATTCTTAGGTGTTTGAGCGGTTCTGGACTGGTTCCGACTGACATGTTGGTGTAAAAAGCGCTCTGTTAACGCCGTAGGGTCCCGTGACCTATAATGCCAAAAAGCCTCATCTGCCTGCTCTCCGTATCCACTCTCTAAGCAGAGCTGACTTGAAGTGTCAGGTTTCAGACCCACATTTGCATAGGCAGTGAGGTGTCACATTTCTGGCCTATTCAAACAATGAATTGATTATCTCTTCCCCTGAGCCCAGCTTGGGAGATGGCAAATGAACAGTGGACAGTCTAGCGAGGCCATCCATTGTGGATTCATCTCACTGTGATATTCTCAGACGGATTTAGCGCTCTCAACACGATGGGATTGTCATAACTCTGGAATGAGAAAACGTTTAATGATGTAGGGGAACTCATAACAAACTCAAGCTGTTATCCTGTCAATACATGTATTGATAGCTGCTATGTGGTAGCCACAAGATAGTGTGTTGAGGGATTGTCCAAGAAGCAGACATTGCACAAGAGTGGCGTTGATTGACTGCTCTTTATATGAATGGGACTTTTTAATGGTTTTAAATGAAATCATGGATTAGAAACCATTTTATTCTCTGTTTATGTAAACTGGCATAGTGGACCTGTTTTGGTGTTTTCTTGATGGAGGAAAACGATGTCTCAGACACCGCTGCTGAGACTTCCATAAGTGTTTActtgggttgagatctggggaCACACCCTTTAAAAcaccctatgctcctttgagacccctcttacaaagtcactgagatcttgtcttctagccatggtagccaaaattaTGGCCAACTGGACATTTTATACATGACCCGAAGCATGataggatgttaattgcttaattaagtCAGAATCCACACCTGTGAGGAAGCACCAGCTTTCAATATACGTTGAATCTCTCATTTACttcattttggcagttacctgtagatacactatatatacaaatgtatgtggacaccccttcaaattaacgtgatttgtcatttcagccacacccgttgctgacaggtacagtgccttgcgaaag

Function

NR:

description
interleukin-6 receptor subunit beta-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021590738.2 True 3964 mRNA 0.46 16 14785987 14806264

Neighbor

gene id symbol gene type direction distance location
LOC110509691 LOC106563019 coding upstream 389179 14289212 ~ 14396808 (+)
LOC110509690 LOC106563020 coding upstream 554750 14215122 ~ 14231240 (+)
LOC110509688 LOC106563021 coding upstream 609991 14171799 ~ 14175996 (+)
prpf4 prpf4 coding upstream 744705 14035322 ~ 14041282 (+)
LOC110509698 NA coding downstream 69453 14875717 ~ 14879923 (+)
LOC110509699 LOC106563142 coding downstream 150076 14956340 ~ 14970212 (+)
trnaa-ugc-224 NA coding downstream 223764 15030028 ~ 15030099 (+)
LOC110509704 NA coding downstream 343024 15149288 ~ 15151748 (+)
LOC110509331 LOC106567539 coding downstream 1032051 15838315 ~ 15844398 (+)
G2155455 NA non-coding upstream 120953 14664802 ~ 14665034 (+)
G2155454 NA non-coding upstream 122892 14662668 ~ 14663095 (+)
G2155402 NA non-coding upstream 186166 14599590 ~ 14599821 (+)
G2155401 NA non-coding upstream 186604 14599164 ~ 14599383 (+)
G2155398 NA non-coding upstream 197738 14588038 ~ 14588249 (+)
G2155517 NA non-coding downstream 8180 14814444 ~ 14817916 (+)
G2155717 NA non-coding downstream 299718 15105982 ~ 15108773 (+)
G2156433 NA non-coding downstream 626370 15432634 ~ 15432922 (+)
G2156469 NA non-coding downstream 650809 15457073 ~ 15457322 (+)
G2156480 NA non-coding downstream 663323 15469587 ~ 15469788 (+)
G2154512 NA other upstream 850168 13915670 ~ 13935819 (+)
G2154438 NA other upstream 972017 13806013 ~ 13813970 (+)
G2154391 NA other upstream 1009853 13772708 ~ 13776134 (+)
G2154294 NA other upstream 1116817 13668289 ~ 13669170 (+)
G2153316 NA other upstream 2025497 12759880 ~ 12760490 (+)
G2155696 NA other downstream 212363 15018627 ~ 15093949 (+)
G2157602 NA other downstream 1544453 16350717 ~ 16353665 (+)
G2158499 LOC106563144 other downstream 2383080 17189344 ~ 17191128 (+)
LOC110509751 LOC106563328 other downstream 4254279 18962089 ~ 19065920 (+)
LOC118945267 NA other downstream 4259914 19066137 ~ 19068784 (+)

Expression

LOC110509696(LOC106563151) Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 1.25.
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LOC110509696(LOC106563151) Expression in each Bioproject

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LOC110509696(LOC106563151) Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 8.
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Co-expression Network