Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110509699 |
| gene name | LOC106563142 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 14956340 ~ 14970212 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| small glutamine-rich tetratricopeptide repeat-containing protein beta-like |
| id | description |
|---|---|
| K24925 | SGTB; small glutamine-rich tetratricopeptide repeat-containing protein beta |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036967986.1 | False | 1034 | mRNA | 0.50 | 10 | 14956340 | 14969875 |
| XM_021590740.2 | True | 1409 | mRNA | 0.48 | 11 | 14956340 | 14970212 |
14,946,000
14,948,000
14,950,000
14,952,000
14,954,000
14,956,000
14,958,000
14,960,000
14,962,000
14,964,000
14,966,000
14,968,000
14,970,000
14,972,000
14,974,000
14,976,000
NC_048593.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509698 | NA | coding | upstream | 76417 | 14875717 ~ 14879923 (+) |
| LOC110509696 | LOC106563151 | coding | upstream | 150076 | 14785987 ~ 14806264 (+) |
| LOC110509691 | LOC106563019 | coding | upstream | 559532 | 14289212 ~ 14396808 (+) |
| LOC110509690 | LOC106563020 | coding | upstream | 725103 | 14215122 ~ 14231240 (+) |
| LOC110509688 | LOC106563021 | coding | upstream | 780344 | 14171799 ~ 14175996 (+) |
| trnaa-ugc-224 | NA | coding | downstream | 59816 | 15030028 ~ 15030099 (+) |
| LOC110509704 | NA | coding | downstream | 179076 | 15149288 ~ 15151748 (+) |
| LOC110509331 | LOC106567539 | coding | downstream | 868103 | 15838315 ~ 15844398 (+) |
| LOC110509705 | LOC106563137 | coding | downstream | 953639 | 15923851 ~ 15929722 (+) |
| ehmt1b | NA | coding | downstream | 1061545 | 16031757 ~ 16061375 (+) |
| G2155517 | NA | non-coding | upstream | 138424 | 14814444 ~ 14817916 (+) |
| G2155455 | NA | non-coding | upstream | 291306 | 14664802 ~ 14665034 (+) |
| G2155454 | NA | non-coding | upstream | 293245 | 14662668 ~ 14663095 (+) |
| G2155402 | NA | non-coding | upstream | 356519 | 14599590 ~ 14599821 (+) |
| G2155401 | NA | non-coding | upstream | 356957 | 14599164 ~ 14599383 (+) |
| G2155717 | NA | non-coding | downstream | 135770 | 15105982 ~ 15108773 (+) |
| G2156433 | NA | non-coding | downstream | 462422 | 15432634 ~ 15432922 (+) |
| G2156469 | NA | non-coding | downstream | 486861 | 15457073 ~ 15457322 (+) |
| G2156480 | NA | non-coding | downstream | 499375 | 15469587 ~ 15469788 (+) |
| G2156481 | NA | non-coding | downstream | 499936 | 15470148 ~ 15470489 (+) |
| G2154512 | NA | other | upstream | 1020521 | 13915670 ~ 13935819 (+) |
| G2154438 | NA | other | upstream | 1142370 | 13806013 ~ 13813970 (+) |
| G2154391 | NA | other | upstream | 1180206 | 13772708 ~ 13776134 (+) |
| G2154294 | NA | other | upstream | 1287170 | 13668289 ~ 13669170 (+) |
| G2153316 | NA | other | upstream | 2195850 | 12759880 ~ 12760490 (+) |
| G2155696 | NA | other | downstream | 48415 | 15018627 ~ 15093949 (+) |
| G2157602 | NA | other | downstream | 1380505 | 16350717 ~ 16353665 (+) |
| G2158499 | LOC106563144 | other | downstream | 2219132 | 17189344 ~ 17191128 (+) |
| LOC110509751 | LOC106563328 | other | downstream | 4090331 | 18962089 ~ 19065920 (+) |
| LOC118945267 | NA | other | downstream | 4095966 | 19066137 ~ 19068784 (+) |
