slc31a2 (copt2)


Basic Information

Item Value
gene id slc31a2
gene name copt2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 16765345 ~ 16776377 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021590777.2
tatgacacctTCTACATTACTCTGATcctggcaacctcaacctgccttCCTCTCACTGGGCACCTCTGATCTCCAGCACAATGGGGACTACTACAGTTTACAAACAACTTTTTCCACCGATACTACACATCCAAGGAATCTCCCTTCTACACATTGTTGCCGATTGCGTCTAGCTGCCTTGCAAATTAATGATATGCACAAGActacatctaccatctacccttGCGACATTTTATAACGTCATGTGGTGCCGCGGCATCATCATTGTCAAACTGTGCAGGGCAGAAGCATGTTTATGGTAGCCTGCTGCCAGAAACGAGAAGAAGTGGAATGCAACTAAATCCCGTCAAAACGTCGTCTCTAGTTCGCTCTCGTCGGTGATGGGGAGTCAAAGGGCCTGAGGAaacccacccccccaaaaaatcttatTTGTCTGCTCAAGTTGATCTATCATGTCTATGACCTTTGAGGCAGGGAGCAGCGTGACGCTGCTGTTTCACTTCTGGGATGTGCAAGGACCTGCAGGGATGGTGCTGTCGGTGTTCGTGGTTCTCCTGTTGACCGTGTTCTACGAGCTGCTGAAGGTGTGGAGGGTCTGGCTGGGGAAGCGCCCCTCTCCCTTCCAATCCTCAGACTGCCGGGGAAGCAGCACTGCATTAGCCAGTAGCCTGTCGGTGTCCTCTCTGGCCCCCATGGAACAGActgcccccactctctcccccacgaACAGATGGCTTCTCCGTGGGATCCAGACAGCCCTGCACATCCTGCAGGTAACCCTTGGCTACATGCTGATGTTGTGCGTCATGTCCTACAACACCTGGATCTTCCTGGGGGTCATCTTGGGCTCCGTCCTGGGATACTTCATAGGGTTCCCGCTACTGGGTCAAATCTGATCAAACAGTGGAATCAACAGAACGAGAATAATCATTTTCCTGGACTATAGATCTATAGGCACTAGTTATCCTGTTGGACAAAGATGTGCTCTGACAAACATATCACAGCACCTCATGGTGTTTTTCATACCGACCCTGTTGCACACTCCATGTGCGATAGATCTCCCCGTGACTGTCACTTCAAGTTACCTGAAGTGAAAGGTGGTTCTCCCCTACTTATCTTAAAGCAGAGGTGTGCGAAGTAAAAAGCAAGATGGAGGCTTCCATAGTGTGACAAAGAGTACAGCATGGTAGGGGAGTGATCGAGCACACCCATGGTACATTTAAGATAAGtctcaggaagttaatgcttattttttttgtgttaccCTGTATGACCTACTGTACTATGCATATCCACTGACATATGTTTGAGAAGAGCTTGAGTTCAACCTGTGGCCTCATTCTAGCATCTAACGCCAAGGTCAGGCTTACTTGCAGAGGGAACTGAGATTATGCATTTCGTCAGCACTAGTCACaagacattttctggaattgccACTGACAGCACAGAAGCATGTGATTGAGTGTTGTAACTCCGTCAGGCTCATTATGTAAGTGTTTAAATTGCTCTTAAGTACATAGAGAACTGAAAATGCGGCTCTCGTTGATCATTTGTGAGAGAGACCGTATACCCCAACCTTTTAGTGCCTTTTGATATCCTAAATACATTTCAGAGGCATATTTCCTGTTGAATTATACGGTAACCTAATCATGGATGAACGCAAAGCTTTTCTTCAAATCCTATTGATCTACAGTAAACTGAAAGTAGATCATGGCCTGCTTTTAATCTGAGCTTTTCAATGGACTTTATATGAACATGTGCTTACTACTGTTGTATTTTACAGATAGTAATAAAACAAATACCACTAA
>XM_021590778.2
gacccaaatgttttttttttcaaccaaACCGTCGAAACCCCAGGGAGAAACCAAATCAGACGGTGCTTAGCTTCTTTGGTGGCTACTTACTTAGCAAGCAGTCTACTACAAACGACGAGCTTTGAGGATACCTCGTGACGCTATTGGTCGAGGCGGCAGAAGTAAAAGGAAGACATTGGCTGTGTTCGAGAGGATCAACACCGTCCAAATGACCTTTGAGGCAGGGAGCAGCGTGACGCTGCTGTTTCACTTCTGGGATGTGCAAGGACCTGCAGGGATGGTGCTGTCGGTGTTCGTGGTTCTCCTGTTGACCGTGTTCTACGAGCTGCTGAAGGTGTGGAGGGTCTGGCTGGGGAAGCGCCCCTCTCCCTTCCAATCCTCAGACTGCCGGGGAAGCAGCACTGCATTAGCCAGTAGCCTGTCGGTGTCCTCTCTGGCCCCCATGGAACAGActgcccccactctctcccccacgaACAGATGGCTTCTCCGTGGGATCCAGACAGCCCTGCACATCCTGCAGGTAACCCTTGGCTACATGCTGATGTTGTGCGTCATGTCCTACAACACCTGGATCTTCCTGGGGGTCATCTTGGGCTCCGTCCTGGGATACTTCATAGGGTTCCCGCTACTGGGTCAAATCTGATCAAACAGTGGAATCAACAGAACGAGAATAATCATTTTCCTGGACTATAGATCTATAGGCACTAGTTATCCTGTTGGACAAAGATGTGCTCTGACAAACATATCACAGCACCTCATGGTGTTTTTCATACCGACCCTGTTGCACACTCCATGTGCGATAGATCTCCCCGTGACTGTCACTTCAAGTTACCTGAAGTGAAAGGTGGTTCTCCCCTACTTATCTTAAAGCAGAGGTGTGCGAAGTAAAAAGCAAGATGGAGGCTTCCATAGTGTGACAAAGAGTACAGCATGGTAGGGGAGTGATCGAGCACACCCATGGTACATTTAAGATAAGtctcaggaagttaatgcttattttttttgtgttaccCTGTATGACCTACTGTACTATGCATATCCACTGACATATGTTTGAGAAGAGCTTGAGTTCAACCTGTGGCCTCATTCTAGCATCTAACGCCAAGGTCAGGCTTACTTGCAGAGGGAACTGAGATTATGCATTTCGTCAGCACTAGTCACaagacattttctggaattgccACTGACAGCACAGAAGCATGTGATTGAGTGTTGTAACTCCGTCAGGCTCATTATGTAAGTGTTTAAATTGCTCTTAAGTACATAGAGAACTGAAAATGCGGCTCTCGTTGATCATTTGTGAGAGAGACCGTATACCCCAACCTTTTAGTGCCTTTTGATATCCTAAATACATTTCAGAGGCATATTTCCTGTTGAATTATACGGTAACCTAATCATGGATGAACGCAAAGCTTTTCTTCAAATCCTATTGATCTACAGTAAACTGAAAGTAGATCATGGCCTGCTTTTAATCTGAGCTTTTCAATGGACTTTATATGAACATGTGCTTACTACTGTTGTATTTTACAGATAGTAATAAAACAAATACCACTAA

Function

NR:

description
probable low affinity copper uptake protein 2 isoform X1

GO:

id name namespace
GO:0035434 copper ion transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005375 copper ion transmembrane transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021590777.2 False 1808 mRNA 0.46 4 16765345 16775453
XM_021590778.2 True 1558 mRNA 0.46 4 16765345 16776377
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Neighbor

gene id symbol gene type direction distance location
stxbp1a LOC106563129 coding downstream 63812 16658386 ~ 16701533 (-)
LOC110509706 LOC106563136 coding downstream 747846 15970492 ~ 16017499 (-)
LOC110509703 LOC106563138 coding downstream 1340037 15105979 ~ 15425308 (-)
LOC110509702 LOC106563139 coding downstream 1688335 15038817 ~ 15087213 (-)
LOC110509700 LOC106563141 coding downstream 1764754 14973955 ~ 15000591 (-)
LOC110509719 fut7 coding upstream 82543 16858920 ~ 16866531 (-)
LOC110509724 LOC106563119 coding upstream 289985 17066362 ~ 17093537 (-)
LOC110509723 LOC106563118 coding upstream 317679 17094056 ~ 17135891 (-)
LOC110509725 LOC106563120 coding upstream 359873 17136250 ~ 17139610 (-)
adora2ab LOC106563117 coding upstream 367875 17144252 ~ 17149259 (-)
G2158149 NA non-coding downstream 61260 16703587 ~ 16704085 (-)
G2158109 NA non-coding downstream 123459 16641061 ~ 16641886 (-)
G2158108 NA non-coding downstream 124391 16640735 ~ 16640954 (-)
G2158107 NA non-coding downstream 124642 16640078 ~ 16640703 (-)
G2158101 akna non-coding downstream 129551 16635422 ~ 16635794 (-)
G2158198 LOC106567281 non-coding upstream 20524 16796901 ~ 16799275 (-)
G2158213 NA non-coding upstream 65024 16841401 ~ 16843760 (-)
G2158264 NA non-coding upstream 104531 16880908 ~ 16881194 (-)
G2158274 NA non-coding upstream 117399 16893776 ~ 16894001 (-)
G2158281 LOC106563121 non-coding upstream 124440 16900817 ~ 16912573 (-)
G2158111 akna other downstream 118748 16643681 ~ 16646597 (-)
G2158088 LOC100136012 other downstream 157339 16607625 ~ 16608006 (-)
G2157743 NA other downstream 341924 16421677 ~ 16423421 (-)
G2157715 NA other downstream 379300 16381190 ~ 16386045 (-)
G2155120 NA other downstream 2534339 14227820 ~ 14231006 (-)
LOC110509757 LOC106563370 other upstream 2499891 19275539 ~ 19277044 (-)
G2162005 NA other upstream 3208168 19984545 ~ 19984779 (-)
G2162127 NA other upstream 3306768 20083145 ~ 20083618 (-)
LOC110509788 LOC106563294 other upstream 3311853 20088225 ~ 20093695 (-)
G2162405 LOC106563289 other upstream 3532812 20309189 ~ 20309802 (-)

Expression

slc31a2(copt2) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 60.
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slc31a2(copt2) Expression in each Bioproject

Bar chart with 21 bars.
slc31a2(copt2) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 2000.
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Co-expression Network