Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110509725 |
| gene name | LOC106563120 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 17136250 ~ 17139610 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | name | namespace |
|---|---|---|
| GO:0019013 | viral nucleocapsid | cellular_component |
| id | description |
|---|---|
| K11088 | SNRPD3, SMD3; small nuclear ribonucleoprotein D3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021590790.2 | True | 725 | mRNA | 0.44 | 4 | 17136250 | 17139610 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509723 | LOC106563118 | coding | downstream | 359 | 17094056 ~ 17135891 (-) |
| LOC110509724 | LOC106563119 | coding | downstream | 42713 | 17066362 ~ 17093537 (-) |
| LOC110509719 | fut7 | coding | downstream | 269719 | 16858920 ~ 16866531 (-) |
| slc31a2 | copt2 | coding | downstream | 359873 | 16765345 ~ 16776377 (-) |
| stxbp1a | LOC106563129 | coding | downstream | 434717 | 16658386 ~ 16701533 (-) |
| adora2ab | LOC106563117 | coding | upstream | 4642 | 17144252 ~ 17149259 (-) |
| specc1lb | LOC106563144 | coding | upstream | 31074 | 17170684 ~ 17200792 (-) |
| LOC110509728 | LOC106566295 | coding | upstream | 64425 | 17204035 ~ 17335060 (-) |
| LOC110509730 | LOC106563153 | coding | upstream | 201151 | 17340761 ~ 17383473 (-) |
| LOC110509734 | ub2g1 | coding | upstream | 279669 | 17419279 ~ 17425513 (-) |
| G2158892 | NA | non-coding | downstream | 12249 | 17119424 ~ 17124001 (-) |
| G2158886 | NA | non-coding | downstream | 37832 | 17098040 ~ 17098418 (-) |
| G2158423 | NA | non-coding | downstream | 70565 | 17065435 ~ 17065685 (-) |
| G2158367 | NA | non-coding | downstream | 75614 | 16968084 ~ 17060636 (-) |
| G2158360 | NA | non-coding | downstream | 93078 | 16957807 ~ 17043172 (-) |
| G2158897 | NA | non-coding | upstream | 27554 | 17167164 ~ 17168300 (-) |
| G2158923 | NA | non-coding | upstream | 55019 | 17194629 ~ 17194846 (-) |
| G2158925 | NA | non-coding | upstream | 61838 | 17201448 ~ 17202531 (-) |
| G2158111 | akna | other | downstream | 489653 | 16643681 ~ 16646597 (-) |
| G2158088 | LOC100136012 | other | downstream | 528244 | 16607625 ~ 16608006 (-) |
| G2157743 | NA | other | downstream | 712829 | 16421677 ~ 16423421 (-) |
| G2157715 | NA | other | downstream | 750205 | 16381190 ~ 16386045 (-) |
| G2155120 | NA | other | downstream | 2905244 | 14227820 ~ 14231006 (-) |
| LOC110509757 | LOC106563370 | other | upstream | 2136658 | 19275539 ~ 19277044 (-) |
| G2162005 | NA | other | upstream | 2844935 | 19984545 ~ 19984779 (-) |
| G2162127 | NA | other | upstream | 2943535 | 20083145 ~ 20083618 (-) |
| LOC110509788 | LOC106563294 | other | upstream | 2948620 | 20088225 ~ 20093695 (-) |
| G2162405 | LOC106563289 | other | upstream | 3169579 | 20309189 ~ 20309802 (-) |
