LOC100136690 (LOC100136690)


Basic Information

Item Value
gene id LOC100136690
gene name LOC100136690
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 19673166 ~ 19676413 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001124658.1
TTGTACAGTGCAGTGTTTTCTGTCTTCAGCAAATCAACTCATCTTTCGAAATGGCTCTCCCTATGACCAGAAGTCGCCTGGCTTCCTCAGAGAACCAAACTACTCTGCCGGGCAAGGCTGTTTTGGGAACTAAGCCTACACTGAGACCACGAGCTGCGCTCGGCGAAATCGGAAATGTTGGAGTCCCCAGACAGACTTTGAAAAAGAATGCAAAGGCAGAAACCACTAAGGTGGTTGACAGGAAGACCAGCACGCGGGCTGAAAAAGCCCAGGTGGTTCAACCACCAAAGATAGTAGTTTTTGCCCCTGTTCAGGTTTTGCCTGAGCCAATGTCTCCCACACCAATGGAGACCTCTGGCTGTGCTCCCAACGAGCTGTGCCAGGCCTTCTCAGATGTCCTACTTAATATCAAGGATGTAGATGCTGACGACTATGACAACCCCATGCTCTGCAGTGACTATGTGAAGGACATCTACAAATATCTCCAGAAACTTGAGATTGATCAGGCTGTCAAACCCAACTATCTGGCGGGACAGGAAATTACAGGCAACATGCGTGCTATCCTCATCGATTGGCTTGTCCAGGTCCAAATCAAGTTTCGCCTGCTGCAGGAGACCATGTTCATGACTGTGGGAATCATTGATCGCTTCCTTCAGGATAACCCAGTGCCCAAAAAGCAGCTCCAGCTTGTTGGTGTGACAGCCATGTTCATTGCCTCCAAATACGAGGAGATGTACCCTCCGGAGATCGTAGACTTTGCCTTTGTTACCGACCAGGCCTACACCACTGCACAGATCAGGGACATGGAGATGAAGATCCTAAGGGTGCTGAAGTTCAGCTTTGGCCGCCCTCTCCCCCTCCAGTTCCTCAGAAGGGCCTCAAAGATTGGTGAGGTGACTGCTGAGCACCACACCCTGGCAAAGTACTTTGTGGAGCTCACCATGGTGGACTACGAGATGGTgcacttccctccctcccaggtgGCCAGTGCCGCCTTTGCCCTCACCCTGAAGGTCTTCAACTGCGGCGAATGGAGCTCCACACTACAGCATTACATGAACTACACAGAAGACAGCCTGGTCCATGCCATGCAGCACATCGCTAAAAATGTTCTGAAGGTGAACGAGGGACAAACTAAGCATATGACGGTTAAGAACAAGTACTCTAGTCAGAAGCAGATGAGAATTGCAACTATTTCACAGCTAAAGTCTTCGCTGATCAAGGACCTTGCAAAACAACTCACCCTATGAGATGCCTGCTGGTGCTATGTGCTGCTTGTACTGTACAGAATATATgactttaaatgtttttatttttttagttaAGTCTTAACAACTGGGAGAAATGTTAGTGTTGAAGTGTACAGCTTGTGTTCCAACACCTGGGTGTTGGACTTCCTGGTAATTAAATGCATTGACCTAAAGTAGGTATGTTCTGCCTGGCAATCAATGTAACTTGCATGTATGATCAAGACTGTATATTCATGTCATGCCAATAAACATTTTATAAACTTTTAAATCCTG

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity biological_process
GO:0005634 nucleus cellular_component
GO:0019901 protein kinase binding molecular_function

KEGG:

id description
K05868 CCNB1; G2/mitotic-specific cyclin-B1

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001124658.1 True 1523 mRNA 0.48 9 19673166 19676413

Neighbor

gene id symbol gene type direction distance location
slc30a5 slc30a5 coding upstream 859 19666183 ~ 19672307 (+)
LOC110509340 LOC106563366 coding upstream 13165 19651752 ~ 19660001 (+)
LOC110509767 LOC105015049 coding upstream 28198 19630925 ~ 19644968 (+)
LOC118936421 smc5 coding upstream 41315 19628508 ~ 19631851 (+)
LOC110509769 smc5 coding upstream 46506 19619646 ~ 19626660 (+)
LOC110509364 LOC106563314 coding downstream 128949 19805362 ~ 19806854 (+)
LOC110509774 LOC106563307 coding downstream 163253 19839666 ~ 19844815 (+)
LOC110509777 NA coding downstream 170610 19847023 ~ 19849150 (+)
fbxw5 LOC106563306 coding downstream 183980 19860393 ~ 19873346 (+)
LOC118936353 NA coding downstream 228371 19904784 ~ 19908478 (+)
G2161585 NA non-coding upstream 11435 19661528 ~ 19661731 (+)
G2161568 NA non-coding upstream 54750 19616722 ~ 19618416 (+)
G2161492 NA non-coding upstream 187838 19485098 ~ 19485328 (+)
G2161468 NA non-coding upstream 208534 19464274 ~ 19464632 (+)
G2161600 NA non-coding downstream 11088 19687501 ~ 19687838 (+)
G2161601 NA non-coding downstream 12460 19688873 ~ 19689146 (+)
G2161656 NA non-coding downstream 112486 19788899 ~ 19789132 (+)
G2161679 NA non-coding downstream 121677 19798090 ~ 19799509 (+)
G2161680 NA non-coding downstream 123232 19799645 ~ 19800262 (+)
LOC110509766 LOC106566689 other upstream 56655 19609602 ~ 19616511 (+)
LOC110509753 LOC106563373 other upstream 535598 19136428 ~ 19138160 (+)
LOC118945267 NA other upstream 604382 19066137 ~ 19068784 (+)
LOC110509751 LOC106563328 other upstream 607394 18962089 ~ 19065920 (+)
G2158499 LOC106563144 other upstream 2482038 17189344 ~ 17191128 (+)
G2161635 LOC106563312 other downstream 65401 19741814 ~ 19752743 (+)
G2161678 NA other downstream 118847 19795260 ~ 19797774 (+)
LOC110509811 LOC106563272 other downstream 1521505 21160126 ~ 21389662 (+)
G2163804 LOC106613263 other downstream 1924005 21600418 ~ 21601052 (+)
G2165628 LOC106563266 other downstream 3160658 22837071 ~ 22841481 (+)

Expression


Co-expression Network