LOC110509774 (LOC106563307)


Basic Information

Item Value
gene id LOC110509774
gene name LOC106563307
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 19839666 ~ 19844815 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021590871.2
GACATCTGGCAAAAACAACATATGGCAAAATACATGTGCATCTGGTGGACATACGGCCCAATGCTCACACAGCTGTtcggagcatgctagatagctaattagcgcAGGCGGTCGCCTACTGTCTTCcgtaaacaagcgctgtaacGTGGAGATACGGTCAcgtgggaacactaaccctatcaagcgcAAAGATGCAGCCGGTTGATTCTCTCCTCCACAGTGGCTATTTTCACGCAACACTCAGATGCTGGCAGAGCTGCTCCTCAGACTTGAGACCTGAGAATCTTATTTACCCCATCTTCGTCACTGACAGTCCTGATGCTGTGGAGCCCATCGCTAGTCTACCAGGCCAGGCCAGATATGGAGTGAATAAACTGGAAGGCATGCTACGCCCCCTTGTGGAGAAAGGCTTGAAGTGTGTGCTGATTTTCGGCGTGCCTGCCAAAATCGCTAAGGATGAGAGGGGTTCGGGTGCAGACACAGGTGATACTCCGGCAGTATTGGCTGTGAAGAAGATAAGCTCTCTGTTCCCTGACCTGCTGATGGCCTGTGACGTCTGCCTCTGTCCCTACACCTCACATGGACACTGTGGAATCTTGCGGGAGGATGGCACTCTGGACAATGGTGCCAGTTGCCAGCGTCTGGCAGAAGTGGCATTGGCTTACGCACGTGCTGGCTGTCACATCATTGCACCCTCTGATATGATGGATGGGCGAGTGGGAGCCATCAAACAATCACTGATGTCCAATGACATGGGCAACAAGGTTTCAGTACTAAGCTACAGTGCTAAATTTGCTTCCTGTTACTATGGTCCCTTCAGagATGCAGCACAGTCCACACCAGCATTTGGAGACAGGCGTTGTTATCAGCTGCCACCTGGTGCAAGGGGCCTGGCACTGCGAGCTGTGGACAGAGACGTCAAGGAGGGGGCAGATATGCTGATGGTGAAGCCAGGACTGCCCTATCTGGACATAGTGAGGGAGGTCAAAGACAAGCACCCCAATCACCCACTGGCGGTGTATAACGTGTCAGGGGAGTTTGCCATGCTGTGGCATGGAGCTCAGGCTGGAGCCTTTGACCTGCGCACCGCTGTACTGGAGTCTATGACCGCCTTCCGCAGGGCAGGTGCTGACATCATCATCACCTACTACGCACCTCAACTGCTCACCTGGCTGAAAGAGTAACAGACAGAAGGATGGACCTACGGATTGACATGCGATTAGCTCCTTTTTACCAAGCTGTTCAATGCTGAACTACACTGACAAATGGGGTCTACTGAAGCCAAACTGACATGTGAGAACAGGCAATCTATCTTCATACATTAATTTACAGTTTATTTTTCTATATAACATTGATATTTTATTCTGGGACTCTTTTTTTATCATGTGCAGCAACCACAAATTTTCACCAAAGATGGTATTCTTCTAGCTCGTAACCACAGCATATCAAATAAGGTTTGAAGGgttagcctaatgttagcttTTACAGTCCCGTTTTTTCATCTATCTGTTGATTGTCTTGGTGGGTTTATGGGTATTTTTTACTATTCTATAGTTTTCCAAATTGAGTAATTATGGACTTTTATTTTACTTCTATTTTATTCTGTGCCTTCTGTAATAGCCACTCTGGCTTCAGCACTGATATTTACTAGTGTTTGTAAGGTTGGGTTAAGAAACCTGTAAAGCTCTTATTGACCAGGGTAAATGGACCTATCCAATATCCACATTTTTTTGGATAACAACAATAAAGCTACAATCGAGTTTGAAATATGG
>XM_021590870.2
TTTTCATTCCGTCACTTAAATCTACCGTGTACTATCGCGGGAACTTGCACGTTTACGGAACAATTTGTGCAGTGAGGTGGCTGGTTAGTGTCTGCGTCTAGTGCAAGTCAAGGAGGACGTACGTACTGTACAAGcgcAAAGATGCAGCCGGTTGATTCTCTCCTCCACAGTGGCTATTTTCACGCAACACTCAGATGCTGGCAGAGCTGCTCCTCAGACTTGAGACCTGAGAATCTTATTTACCCCATCTTCGTCACTGACAGTCCTGATGCTGTGGAGCCCATCGCTAGTCTACCAGGCCAGGCCAGATATGGAGTGAATAAACTGGAAGGCATGCTACGCCCCCTTGTGGAGAAAGGCTTGAAGTGTGTGCTGATTTTCGGCGTGCCTGCCAAAATCGCTAAGGATGAGAGGGGTTCGGGTGCAGACACAGGTGATACTCCGGCAGTATTGGCTGTGAAGAAGATAAGCTCTCTGTTCCCTGACCTGCTGATGGCCTGTGACGTCTGCCTCTGTCCCTACACCTCACATGGACACTGTGGAATCTTGCGGGAGGATGGCACTCTGGACAATGGTGCCAGTTGCCAGCGTCTGGCAGAAGTGGCATTGGCTTACGCACGTGCTGGCTGTCACATCATTGCACCCTCTGATATGATGGATGGGCGAGTGGGAGCCATCAAACAATCACTGATGTCCAATGACATGGGCAACAAGGTTTCAGTACTAAGCTACAGTGCTAAATTTGCTTCCTGTTACTATGGTCCCTTCAGagATGCAGCACAGTCCACACCAGCATTTGGAGACAGGCGTTGTTATCAGCTGCCACCTGGTGCAAGGGGCCTGGCACTGCGAGCTGTGGACAGAGACGTCAAGGAGGGGGCAGATATGCTGATGGTGAAGCCAGGACTGCCCTATCTGGACATAGTGAGGGAGGTCAAAGACAAGCACCCCAATCACCCACTGGCGGTGTATAACGTGTCAGGGGAGTTTGCCATGCTGTGGCATGGAGCTCAGGCTGGAGCCTTTGACCTGCGCACCGCTGTACTGGAGTCTATGACCGCCTTCCGCAGGGCAGGTGCTGACATCATCATCACCTACTACGCACCTCAACTGCTCACCTGGCTGAAAGAGTAACAGACAGAAGGATGGACCTACGGATTGACATGCGATTAGCTCCTTTTTACCAAGCTGTTCAATGCTGAACTACACTGACAAATGGGGTCTACTGAAGCCAAACTGACATGTGAGAACAGGCAATCTATCTTCATACATTAATTTACAGTTTATTTTTCTATATAACATTGATATTTTATTCTGGGACTCTTTTTTTATCATGTGCAGCAACCACAAATTTTCACCAAAGATGGTATTCTTCTAGCTCGTAACCACAGCATATCAAATAAGGTTTGAAGGgttagcctaatgttagcttTTACAGTCCCGTTTTTTCATCTATCTGTTGATTGTCTTGGTGGGTTTATGGGTATTTTTTACTATTCTATAGTTTTCCAAATTGAGTAATTATGGACTTTTATTTTACTTCTATTTTATTCTGTGCCTTCTGTAATAGCCACTCTGGCTTCAGCACTGATATTTACTAGTGTTTGTAAGGTTGGGTTAAGAAACCTGTAAAGCTCTTATTGACCAGGGTAAATGGACCTATCCAATATCCACATTTTTTTGGATAACAACAATAAAGCTACAATCGAGTTTGAAATATGG
>XM_036967567.1
ACAAATCTGCGGAATATGACCAGGAGGAGTTGCAAcgcAAAGATGCAGCCGGTTGATTCTCTCCTCCACAGTGGCTATTTTCACGCAACACTCAGATGCTGGCAGAGCTGCTCCTCAGACTTGAGACCTGAGAATCTTATTTACCCCATCTTCGTCACTGACAGTCCTGATGCTGTGGAGCCCATCGCTAGTCTACCAGGCCAGGCCAGATATGGAGTGAATAAACTGGAAGGCATGCTACGCCCCCTTGTGGAGAAAGGCTTGAAGTGTGTGCTGATTTTCGGCGTGCCTGCCAAAATCGCTAAGGATGAGAGGGGTTCGGGTGCAGACACAGGTGATACTCCGGCAGTATTGGCTGTGAAGAAGATAAGCTCTCTGTTCCCTGACCTGCTGATGGCCTGTGACGTCTGCCTCTGTCCCTACACCTCACATGGACACTGTGGAATCTTGCGGGAGGATGGCACTCTGGACAATGGTGCCAGTTGCCAGCGTCTGGCAGAAGTGGCATTGGCTTACGCACGTGCTGGCTGTCACATCATTGCACCCTCTGATATGATGGATGGGCGAGTGGGAGCCATCAAACAATCACTGATGTCCAATGACATGGGCAACAAGGTTTCAGTACTAAGCTACAGTGCTAAATTTGCTTCCTGTTACTATGGTCCCTTCAGagATGCAGCACAGTCCACACCAGCATTTGGAGACAGGCGTTGTTATCAGCTGCCACCTGGTGCAAGGGGCCTGGCACTGCGAGCTGTGGACAGAGACGTCAAGGAGGGGGCAGATATGCTGATGGTGAAGCCAGGACTGCCCTATCTGGACATAGTGAGGGAGGTCAAAGACAAGCACCCCAATCACCCACTGGCGGTGTATAACGTGTCAGGGGAGTTTGCCATGCTGTGGCATGGAGCTCAGGCTGGAGCCTTTGACCTGCGCACCGCTGTACTGGAGTCTATGACCGCCTTCCGCAGGGCAGGTGCTGACATCATCATCACCTACTACGCACCTCAACTGCTCACCTGGCTGAAAGAGTAACAGACAGAAGGATGGACCTACGGATTGACATGCGATTAGCTCCTTTTTACCAAGCTGTTCAATGCTGAACTACACTGACAAATGGGGTCTACTGAAGCCAAACTGACATGTGAGAACAGGCAATCTATCTTCATACATTAATTTACAGTTTATTTTTCTATATAACATTGATATTTTATTCTGGGACTCTTTTTTTATCATGTGCAGCAACCACAAATTTTCACCAAAGATGGTATTCTTCTAGCTCGTAACCACAGCATATCAAATAAGGTTTGAAGGgttagcctaatgttagcttTTACAGTCCCGTTTTTTCATCTATCTGTTGATTGTCTTGGTGGGTTTATGGGTATTTTTTACTATTCTATAGTTTTCCAAATTGAGTAATTATGGACTTTTATTTTACTTCTATTTTATTCTGTGCCTTCTGTAATAGCCACTCTGGCTTCAGCACTGATATTTACTAGTGTTTGTAAGGTTGGGTTAAGAAACCTGTAAAGCTCTTATTGACCAGGGTAAATGGACCTATCCAATATCCACATTTTTTTGGATAACAACAATAAAGCTACAATCGAGTTTGAAATATGG
>XM_036967569.1
GTTAGCTTTCTGTCGTTCATTACATCTGTCGTTCGTCACATCCCGATATAAAACTGTTGTTTTACATCGGATTTTGCTTAGTTCTCATAAATGTAGACCTTGAATGTCAATGATCTTGAAATTATAGAATTAAAGGGATCTGCAATGGGCTTTCATAAATcgcAAAGATGCAGCCGGTTGATTCTCTCCTCCACAGTGGCTATTTTCACGCAACACTCAGATGCTGGCAGAGCTGCTCCTCAGACTTGAGACCTGAGAATCTTATTTACCCCATCTTCGTCACTGACAGTCCTGATGCTGTGGAGCCCATCGCTAGTCTACCAGGCCAGGCCAGATATGGAGTGAATAAACTGGAAGGCATGCTACGCCCCCTTGTGGAGAAAGGCTTGAAGTGTGTGCTGATTTTCGGCGTGCCTGCCAAAATCGCTAAGGATGAGAGGGGTTCGGGTGCAGACACAGGTGATACTCCGGCAGTATTGGCTGTGAAGAAGATAAGCTCTCTGTTCCCTGACCTGCTGATGGCCTGTGACGTCTGCCTCTGTCCCTACACCTCACATGGACACTGTGGAATCTTGCGGGAGGATGGCACTCTGGACAATGGTGCCAGTTGCCAGCGTCTGGCAGAAGTGGCATTGGCTTACGCACGTGCTGGCTGTCACATCATTGCACCCTCTGATATGATGGATGGGCGAGTGGGAGCCATCAAACAATCACTGATGTCCAATGACATGGGCAACAAGGTTTCAGTACTAAGCTACAGTGCTAAATTTGCTTCCTGTTACTATGGTCCCTTCAGagATGCAGCACAGTCCACACCAGCATTTGGAGACAGGCGTTGTTATCAGCTGCCACCTGGTGCAAGGGGCCTGGCACTGCGAGCTGTGGACAGAGACGTCAAGGAGGGGGCAGATATGCTGATGGTGAAGCCAGGACTGCCCTATCTGGACATAGTGAGGGAGGTCAAAGACAAGCACCCCAATCACCCACTGGCGGTGTATAACGTGTCAGGGGAGTTTGCCATGCTGTGGCATGGAGCTCAGGCTGGAGCCTTTGACCTGCGCACCGCTGTACTGGAGTCTATGACCGCCTTCCGCAGGGCAGGTGCTGACATCATCATCACCTACTACGCACCTCAACTGCTCACCTGGCTGAAAGAGTAACAGACAGAAGGATGGACCTACGGATTGACATGCGATTAGCTCCTTTTTACCAAGCTGTTCAATGCTGAACTACACTGACAAATGGGGTCTACTGAAGCCAAACTGACATGTGAGAACAGGCAATCTATCTTCATACATTAATTTACAGTTTATTTTTCTATATAACATTGATATTTTATTCTGGGACTCTTTTTTTATCATGTGCAGCAACCACAAATTTTCACCAAAGATGGTATTCTTCTAGCTCGTAACCACAGCATATCAAATAAGGTTTGAAGGgttagcctaatgttagcttTTACAGTCCCGTTTTTTCATCTATCTGTTGATTGTCTTGGTGGGTTTATGGGTATTTTTTACTATTCTATAGTTTTCCAAATTGAGTAATTATGGACTTTTATTTTACTTCTATTTTATTCTGTGCCTTCTGTAATAGCCACTCTGGCTTCAGCACTGATATTTACTAGTGTTTGTAAGGTTGGGTTAAGAAACCTGTAAAGCTCTTATTGACCAGGGTAAATGGACCTATCCAATATCCACATTTTTTTGGATAACAACAATAAAGCTACAATCGAGTTTGAAATATGG

Function

NR:

description
delta-aminolevulinic acid dehydratase-like isoform X1

GO:

id name namespace
GO:0006779 porphyrin-containing compound biosynthetic process biological_process
GO:0046872 metal ion binding molecular_function
GO:0004655 porphobilinogen synthase activity molecular_function

KEGG:

id description
K01698 hemB, ALAD; porphobilinogen synthase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021590871.2 False 1772 mRNA 0.47 12 19839666 19844815
XM_021590870.2 False 1722 mRNA 0.47 12 19840619 19844815
XM_036967567.1 False 1623 mRNA 0.47 12 19840852 19844815
XM_036967569.1 True 1748 mRNA 0.46 12 19840960 19844815

Neighbor

gene id symbol gene type direction distance location
LOC110509364 LOC106563314 coding upstream 32812 19805362 ~ 19806854 (+)
LOC100136690 LOC100136690 coding upstream 163253 19673166 ~ 19676413 (+)
slc30a5 slc30a5 coding upstream 167359 19666183 ~ 19672307 (+)
LOC110509340 LOC106563366 coding upstream 179665 19651752 ~ 19660001 (+)
LOC110509767 LOC105015049 coding upstream 194698 19630925 ~ 19644968 (+)
LOC110509777 NA coding downstream 2208 19847023 ~ 19849150 (+)
fbxw5 LOC106563306 coding downstream 15578 19860393 ~ 19873346 (+)
LOC118936353 NA coding downstream 59969 19904784 ~ 19908478 (+)
LOC110509779 coq4 coding downstream 76787 19921602 ~ 19928559 (+)
zmynd19 LOC106563301 coding downstream 112090 19956905 ~ 19969792 (+)
G2161680 NA non-coding upstream 39404 19799645 ~ 19800262 (+)
G2161679 NA non-coding upstream 40157 19798090 ~ 19799509 (+)
G2161656 NA non-coding upstream 50534 19788899 ~ 19789132 (+)
G2161601 NA non-coding upstream 150520 19688873 ~ 19689146 (+)
G2161600 NA non-coding upstream 151828 19687501 ~ 19687838 (+)
G2161705 NA non-coding downstream 12795 19857610 ~ 19857903 (+)
G2161667 NA non-coding downstream 28859 19873674 ~ 19874296 (+)
G2161661 NA non-coding downstream 35088 19879903 ~ 19880306 (+)
G2161662 NA non-coding downstream 61080 19905895 ~ 19928468 (+)
G2161678 NA other upstream 41892 19795260 ~ 19797774 (+)
G2161635 LOC106563312 other upstream 86923 19741814 ~ 19752743 (+)
LOC110509766 LOC106566689 other upstream 223155 19609602 ~ 19616511 (+)
LOC110509753 LOC106563373 other upstream 702098 19136428 ~ 19138160 (+)
LOC118945267 NA other upstream 770882 19066137 ~ 19068784 (+)
LOC110509811 LOC106563272 other downstream 1353103 21160126 ~ 21389662 (+)
G2163804 LOC106613263 other downstream 1755603 21600418 ~ 21601052 (+)
G2165628 LOC106563266 other downstream 2992256 22837071 ~ 22841481 (+)
G2165973 LOC106563265 other downstream 3280965 23125780 ~ 23134290 (+)
LOC110509345 LOC106563260 other downstream 3670807 23468400 ~ 23534217 (+)

Expression


Co-expression Network