Item | Value |
---|---|
gene id | LOC110509787 |
gene name | LOC106563295 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048593.1 |
NCBI id | CM023247.2 |
chromosome length | 47748341 |
location | 20050795 ~ 20063783 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
paired box protein Pax-8-like |
id | description |
---|---|
K09293 | PAX8; paired box protein 8 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036967984.1 | False | 2698 | mRNA | 0.48 | 12 | 20050795 | 20063779 |
XM_036967979.1 | False | 2938 | mRNA | 0.49 | 13 | 20050795 | 20063782 |
XM_036967980.1 | False | 2774 | mRNA | 0.49 | 12 | 20050795 | 20063782 |
XM_036967982.1 | False | 2645 | mRNA | 0.49 | 11 | 20050795 | 20063782 |
XM_036967981.1 | True | 2810 | mRNA | 0.49 | 12 | 20050795 | 20063783 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110509785 | LOC106563298 | coding | downstream | 24887 | 20023128 ~ 20025908 (-) |
LOC110509780 | LOC106563302 | coding | downstream | 100171 | 19946567 ~ 19950624 (-) |
traf2 | LOC106563303 | coding | downstream | 144922 | 19882762 ~ 19905873 (-) |
LOC110509775 | LOC106563308 | coding | downstream | 210111 | 19837235 ~ 19840684 (-) |
LOC110509773 | LOC106563311 | coding | downstream | 215526 | 19807260 ~ 19835269 (-) |
LOC110509788 | LOC106563294 | coding | upstream | 24442 | 20088225 ~ 20093695 (-) |
lman2la | lman2l | coding | upstream | 75173 | 20138956 ~ 20143762 (-) |
LOC110509794 | ddx54 | coding | upstream | 697878 | 20761661 ~ 20772043 (-) |
LOC110509795 | LOC106563284 | coding | upstream | 747953 | 20811736 ~ 20869832 (-) |
LOC110509797 | exos2 | coding | upstream | 807689 | 20871472 ~ 20878088 (-) |
G2162100 | LOC106563296 | non-coding | downstream | 19835 | 20029093 ~ 20030960 (-) |
G2162098 | NA | non-coding | downstream | 23503 | 20027001 ~ 20027292 (-) |
G2162097 | NA | non-coding | downstream | 27761 | 20022702 ~ 20023034 (-) |
G2162095 | NA | non-coding | downstream | 28854 | 20021638 ~ 20021941 (-) |
G2162091 | NA | non-coding | downstream | 35072 | 20015494 ~ 20015723 (-) |
G2162126 | NA | non-coding | upstream | 18979 | 20082762 ~ 20083004 (-) |
G2162136 | NA | non-coding | upstream | 35762 | 20099545 ~ 20099749 (-) |
G2162137 | NA | non-coding | upstream | 36360 | 20100143 ~ 20100359 (-) |
G2162150 | NA | non-coding | upstream | 44251 | 20108034 ~ 20108286 (-) |
G2162160 | NA | non-coding | upstream | 52511 | 20116294 ~ 20117019 (-) |
G2162005 | NA | other | downstream | 66016 | 19984545 ~ 19984779 (-) |
LOC110509757 | LOC106563370 | other | downstream | 773789 | 19275539 ~ 19277044 (-) |
G2158111 | akna | other | downstream | 3404198 | 16643681 ~ 16646597 (-) |
G2158088 | LOC100136012 | other | downstream | 3442789 | 16607625 ~ 16608006 (-) |
G2157743 | NA | other | downstream | 3627374 | 16421677 ~ 16423421 (-) |
G2162127 | NA | other | upstream | 19362 | 20083145 ~ 20083618 (-) |
G2162405 | LOC106563289 | other | upstream | 245406 | 20309189 ~ 20309802 (-) |
G2162422 | LOC106563345 | other | upstream | 265965 | 20329748 ~ 20330138 (-) |
surf4 | LOC106563281 | other | upstream | 906549 | 20970332 ~ 20978032 (-) |