LOC100135840 (grp78)


Basic Information

Item Value
gene id LOC100135840
gene name grp78
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 21133409 ~ 21137594 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021590926.2
TTCCAACGAACTGCTGTCTGGCCAATGGGAAGCCTCCACGATGGGGAAGAAGTGACGGCTTATATACGGAGAGCACCGTTCATTAAACATTATTTTACAGACTCACAATCGTAGGGGTTTCTGAAGAACACAGGCTGTGAAGCAAATCACTTCCATTGAGATAAACCCCAAAGGAAGACTCCATCGAATTATTTACAAAGTACTTCAGAGTTGCGTGAACAGCCACCGAATAAAGATGAGGCTTTTGTGCATGGTTCTGCTGGTCGCCAGCAGTGTTTTTGCCGATGATGAAGACAAGCGGGAAAGTGTGGGAACCGTGGTTGGCATCGACTTGGGGACCACCTATTCCTGTGTTGGTGTGTTCAAGAATGGCCGTGTTGAGATCATTGCCAACGACCAGGGAAACCGCATCACTCCATCCTATGTGGCCTTCACCGCAGAGGGGGAGCGTTTAATCGGTGACGCCGCCAAGAACCAGCTCACCTCCAACCCCGAGAACACAGTTTTTGATGCCAAGAGACTGATTGGCCGTGCCTGGACTGATTCTGCTGTACAGCATGACATCAAGTACTTCCCCTTCAAGGTTATCGAGAAGAAGAGCAAGCCCCATATTCAGGTGGACATCGGTGGAGGTCAGCTGAAGACCTTCGCTCCAGAGGAGATCTCTGCCATGGTTCTCACCAAGATGAAGGAAACCGCTGAGGCTTACCTGGGAAAGAAAGTGACACACGCTGTGGTCACTGTCCCCGCCTACTTCAATGACGCCCAGCGTCAGGCCACCAAGGATGCTGGAGTCATCGCCGGCCTGAATGTCATGAGGATTATCAACGAACCAACTGCAGCTGCCATCGCCTACGGCCTGGACAAGAAGGACGGTGAGAAGAACATCCTGGTGTTCGACCTGGGCGGCGGCACCTTTGATGTTTCCCTCCTGACCATCGACAACGGTGTGTTTGAGGTAGTCGCCACCAATGGCGACACCCACTTGGGAGGAGAGGACTTTGACCAGCGTGTCATGGAGCACTTCATCAAGCTGTACAAGAAGAAGACCGGTAAGGACGTGCGCAAGGACAACCGTGCTGTGCAGAAGCTGCGTCGTGAGGTGGAGAAGGCCAAGAGGGGCCTGTCTGCCCAGCACCAGGCTCGCATTGAGATTGAGTCCTTCTTTGACGGAGAGGACTTCTCAGAGACCCTGACACGTGCCAAGTTTGAGGAGCTCAACATGGACCTGTTCCGTTCCACCATGAAGCCCGTGCAGAAGGTGATGGAGGACTCTGACTTGAAGAAGACCGACATTGACGAGATTGTCTTGGTGGGTGGCTCTACCCGTATCCCCAAGGTCCAGCAGCTGGTGAAGGAGTTCTTCAATGGCAAGGAGCCCTCTAGGGGCATCAACCCTGATGAGGCTGTGGCCTATGGAGCTGCCGTGCAGGCTGGAGTGCTGTCTGGAGAGGAGGACACAGGTGACCTGGTTCTTCTGGATGTGTGCCCCCTGACCCTGGGTATTGAGACTGTGGGAGGAGTCATGACCAAGCTGATCCCCAGAAACACTGTGGTGCCAACCAAGAAGTCCCAGATCTTCTCTACCGCCTCTGACAACCAGCCCACTGTCACCATCAAagtttacgaggGTGAGCGTCCCCTGACCAAAGACAACCACCTGCTGGGAACCTTTGACCTGACTGGCATCCCCCCCGCACCTCGTGGTGTGCCCCAGATCGAGGTCACCTTCGAGATTGATGTCAACGGCATCCTGCGCGTCACAGCTGAGGACAAGGGAACAGGCAACAAGAACAAGATCACCATCACCAATGACCAGAACCGTCTGACTCCCGAGGACATTGAGCGCATGGTCAACGATGCGGAGCGCTTCGCCGACGAGGACAAGAAGTTGAAGGAGCGCATTGATGCCCGCAACGAGCTTGAAAGCTACGCCTACTCGCTCAAGAACCAGATCGGCGACAAGGAGAAGCTGGGCGGCAAGCTGTCAGCCGAGGACAAGGAAACCATAGAGAAAGCAGTAGAGGAGAAGATTGAGTGGATGGAGTCTCACCAAGAGGCTGAGCTGGAGGACTTCCAGgcaaagaagaaggagctggaAGAGGTGGTGCAGCCGATCGTCAGCAAGCTTTACGGAAGTGCAGGTGGACCCCCGcctgagggaggagaagaagagggagaggcagaTCAGGGTGATAAGGATGAGTTGTAAGGCTGTCTGGAGTGGCACAGATGTACATATTGGACATAAAATGTTAAGAAAAGGGGCTGCAAAAACGCAACCATGAATCTGCTGGAAAGACTTGTGAAATATTGTTTCAATGTGAGGGACGTTCTCTTCGCTGAGTGGCGGAGGTATACTAGTCGGCCTGTTCGAGGCTCGCTGCTGTTCTCAGGCAGTTTGAAAAGGAGTTCTCTAGGGGGAGGGTTTAGTGGGGTGGGTGCTAGACTGGGGTTTCTGGGTGAAGGGTAACATGTTCACAAGCAATGTTAACAAGTTATTTATTGAATCTGGTCATTGTAGAAAATACTTTCTACTGTAAAGACATTGAAATAAATGTTTGATACAAATGTC

Function

NR:

description
78 kDa glucose-regulated protein

GO:

id name namespace
GO:0006950 response to stress biological_process
GO:0001878 response to yeast biological_process
GO:0005576 extracellular region cellular_component
GO:0005524 ATP binding molecular_function

KEGG:

id description
K09490 HSPA5, BIP; endoplasmic reticulum chaperone BiP

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021590926.2 True 2575 mRNA 0.53 8 21133409 21137594

Neighbor

gene id symbol gene type direction distance location
dnm1a dnm1 coding upstream 37234 21004249 ~ 21096175 (+)
cyh9orf16 cssa11h9orf16 coding upstream 148132 20983463 ~ 20985277 (+)
rab14l LOC106563285 coding upstream 322184 20793882 ~ 20811225 (+)
LOC110509792 LOC106563286 coding upstream 420855 20692911 ~ 20712554 (+)
LOC110509791 LOC106563287 coding upstream 487375 20636564 ~ 20646034 (+)
LOC110509811 LOC106563272 coding downstream 22532 21160126 ~ 21389662 (+)
LOC110509813 LOC106563271 coding downstream 532934 21670528 ~ 21708957 (+)
pappaa LOC106563270 coding downstream 611686 21749280 ~ 21875071 (+)
LOC118945260 NA coding downstream 826079 21963673 ~ 21974980 (+)
trim32 LOC106563269 coding downstream 848171 21985765 ~ 21990241 (+)
G2163023 NA non-coding upstream 626 21127470 ~ 21132783 (+)
G2163071 NA non-coding upstream 55468 21072597 ~ 21077941 (+)
G2162904 NA non-coding upstream 160130 20972262 ~ 20973279 (+)
G2162978 NA non-coding upstream 252420 20880414 ~ 20880989 (+)
G2162853 NA non-coding upstream 454271 20678492 ~ 20679138 (+)
G2163083 rabepk non-coding downstream 5290 21142884 ~ 21146376 (+)
G2163084 NA non-coding downstream 9819 21147413 ~ 21148049 (+)
G2163091 NA non-coding downstream 19601 21157195 ~ 21157414 (+)
G2163093 NA non-coding downstream 21654 21159248 ~ 21159473 (+)
G2163104 NA non-coding downstream 38353 21175947 ~ 21176298 (+)
G2161678 NA other upstream 1335635 19795260 ~ 19797774 (+)
G2161635 LOC106563312 other upstream 1380666 19741814 ~ 19752743 (+)
LOC110509766 LOC106566689 other upstream 1516898 19609602 ~ 19616511 (+)
LOC110509753 LOC106563373 other upstream 1995841 19136428 ~ 19138160 (+)
LOC118945267 NA other upstream 2064625 19066137 ~ 19068784 (+)
G2163804 LOC106613263 other downstream 462824 21600418 ~ 21601052 (+)
G2165628 LOC106563266 other downstream 1699477 22837071 ~ 22841481 (+)
G2165973 LOC106563265 other downstream 1988186 23125780 ~ 23134290 (+)
LOC110509345 LOC106563260 other downstream 2378028 23468400 ~ 23534217 (+)

Expression


Co-expression Network