LOC110509843 (LOC106563244)


Basic Information

Item Value
gene id LOC110509843
gene name LOC106563244
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 24042927 ~ 24045863 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021590981.2
GGGTCCAAAGGACGTTCCCTGCCTGCGGACAGAAGCTCATAGAACAGGATTTGAAAAGAAACTTGACATCTTCTGCTGGGGGAATCTACAGTCTTGGCCTACCAGCGTCAAAACGATGGCATATCCACTTTTACATGTCTTTTTACTTGGAGTTATGCTTCCTATAGCTTCGTCCATGAAGCCACTTTGCAGTAGTAAGATGGACGAGGGGAAGGCAGTGGAGGGAAAGGAAGACGACAAACAACTGCAGTATTACTACAATGAGGGAAAAGGCGCCTGTTTTCCTTTCTTCTACAAAGGACTGGAAGGGAATGAGAACCGCTTCAACACAGACAGGCAGTGTATGAATGCCTGCTCTGACAAGTTTGAAGAGCTCTATCCAGCTGCAGATGGAGTGTGTGGCCTCCCAGTGGACCATGGTAGTTGTTTTGCTATGTTGCTGATGCACTACTACAACGCAGAAGAGGGGAACTGTCGTGTCTTCCACTACAGTGGCTGTCAGGGCAATGGCAACCGCTTCGAGACCCGAGAGCAGTGTCTGCAGACATGCATGGCCAAAGCAGGAAGATTTGGTGGTGCTATGGAACCAGGAACCAACCCAGATGAGAGTTCCACTAATGCAGGACTGATTGTGGGTATTTTAGGAGGAATTGTGTTCGCAGTGGCGGTGATCTCTGCTATTGTTCTTTTTGTTGTCCAAAGGAAAGAGAAATCAAGAAAAGGGAGTGAGCAGGTACCAACTCTTGAGATGAAGTAGAGATGCATCACCCTCAAGCCTTGTTTTGGATTTTGTTTAAATGTGTTATGTTTTAAATGTTGTACTCTATTTTAGTTGAATAAAAAAGGAAAATGTATCCCATGCCTTATCTATATATTTCTTGGTTTACAAACTGTGGGATGTTGACAAAGTTAGCAGGTGATGAGCATTAACCAAACTGTAAATAATGCCTGCATATTGTATGTTGAATTTTGTAACAAGGACTGATCTGATCAACCCTCAAACTGGTCTCAGACGTATAAACTGATCAACTCTCTTTTTCAGAAACCTAAACACTTATTCATGTTCAAATTACAATGCCATGTTTTAAGCAGTGGGggctggtgggatgagctataggaggatgggctcattgtaaggACTGGAATTAAATAATTGGAACGGAGTCAAGTGTGATtgccatatgtttgataccgttccatttatttcattccagccattacaatgagcccgtcctcctatagctcctcccaccatccTCCACTGGTTTTAAGTTAATTATTTTTCAACTAAGTCTATCTTATAAACAATTCAATAGATTGTTGAAAGGATTTACGTTTTTACATTTGGATATGAATGTTTGCATTTGTTCTTTATTGTACAAACATGAAAATAAATGCATTTTCATAA

Function

NR:

description
kunitz-type protease inhibitor 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021590981.2 True 1408 mRNA 0.42 6 24042927 24045863

Neighbor

gene id symbol gene type direction distance location
LOC110509842 LOC106563245 coding upstream 7150 23884122 ~ 24035777 (+)
LOC100301660 LOC106563362 coding upstream 190105 23851125 ~ 23852822 (+)
LOC110509839 fastkd5 coding upstream 215090 23824234 ~ 23827837 (+)
LOC110509838 lzts3 coding upstream 221793 23807094 ~ 23823864 (+)
LOC110509837 LOC106563250 coding upstream 249287 23785060 ~ 23793640 (+)
LOC110509844 LOC106563243 coding downstream 13473 24059336 ~ 24118882 (+)
LOC110509856 LOC100380649 coding downstream 364435 24410298 ~ 24432688 (+)
LOC110509859 LOC106563234 coding downstream 454498 24500361 ~ 24532163 (+)
LOC110509861 LOC106563232 coding downstream 532742 24578605 ~ 24591900 (+)
si:ch211-114l13.9 LOC106563229 coding downstream 587438 24633301 ~ 24642099 (+)
G2166891 NA non-coding upstream 6101 24035853 ~ 24036826 (+)
G2166897 NA non-coding upstream 155886 23886839 ~ 23887041 (+)
G2166889 NA non-coding upstream 163469 23879143 ~ 23879458 (+)
G2166500 LOC106563247 non-coding upstream 185646 23856377 ~ 23857281 (+)
G2166498 NA non-coding upstream 188330 23853570 ~ 23854597 (+)
G2167011 NA non-coding downstream 43524 24089387 ~ 24089859 (+)
G2167018 NA non-coding downstream 63553 24109416 ~ 24109726 (+)
G2167019 NA non-coding downstream 75067 24120930 ~ 24121175 (+)
G2167020 NA non-coding downstream 75479 24121342 ~ 24121653 (+)
G2167089 phpt1 non-coding downstream 181558 24227421 ~ 24231685 (+)
LOC110509345 LOC106563260 other upstream 517596 23468400 ~ 23534217 (+)
G2165973 LOC106563265 other upstream 908637 23125780 ~ 23134290 (+)
G2165628 LOC106563266 other upstream 1201446 22837071 ~ 22841481 (+)
G2163804 LOC106613263 other upstream 2441875 21600418 ~ 21601052 (+)
LOC110509866 LOC106563223 other downstream 1153756 24944825 ~ 25202836 (+)
LOC110509876 LOC106563358 other downstream 2417438 26463263 ~ 26464615 (+)
LOC110509877 LOC106563217 other downstream 2483109 26504919 ~ 26532797 (+)
G2170458 LOC106563185 other downstream 3276242 27322105 ~ 27324765 (+)

Expression


Co-expression Network